RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 Q9UF83 564 aa11.82□□□□□ -0.52
PRKCSH-203ENST00000586486 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
PRKCSH-203ENST00000586486 MRPL23Q16540 153 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-203ENST00000586486 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
PRKCSH-203ENST00000586486 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
PRKCSH-203ENST00000586486 A0A096LPF7 62 aa11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 PPBPP02775 128 aa11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
PRKCSH-203ENST00000586486 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
PRKCSH-203ENST00000586486 SRIP30626 198 aa11.79□□□□□ -0.52
PRKCSH-203ENST00000586486 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
PRKCSH-203ENST00000586486 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
PRKCSH-203ENST00000586486 NUDT3O95989 172 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 PPP1R17O96001 155 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 CKS2P33552 79 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 COLCA2A8K830 154 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 D6R8Y8 96 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 NCR2O95944 276 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 APCSP02743 223 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 UBE2D3P61077 147 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 UBE2D2P62837 147 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAGE1Q13065 139 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAGE4Q13068 117 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAGE5Q13069 117 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 NRACQ8N912 160 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 ZNRF2Q8NHG8 242 aa11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 RPL39LQ96EH5 51 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-203ENST00000586486 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
PRKCSH-203ENST00000586486 RPS10P46783 165 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-203ENST00000586486 OR10J3Q5JRS4 329 aa11.77□□□□□ -0.53
PRKCSH-203ENST00000586486 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.53
PRKCSH-203ENST00000586486 TNFRSF18Q9Y5U5 241 aa11.77□□□□□ -0.53
PRKCSH-203ENST00000586486 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
PRKCSH-203ENST00000586486 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
PRKCSH-203ENST00000586486 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
PRKCSH-203ENST00000586486 PHOX2AO14813 284 aa11.75□□□□□ -0.53
PRKCSH-203ENST00000586486 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-203ENST00000586486 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
PRKCSH-203ENST00000586486 PRELID3AQ96N28 172 aa11.75□□□□□ -0.53
PRKCSH-203ENST00000586486 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-203ENST00000586486 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 RAB5AP20339 215 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 TIRAPP58753 221 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 FABP9Q0Z7S8 132 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 TENM2Q9NT68 2774 aa11.74□□□□□ -0.53
PRKCSH-203ENST00000586486 PLECQ15149 4684 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-203ENST00000586486 NPYP01303 97 aa11.73□□□□□ -0.53
PRKCSH-203ENST00000586486 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-203ENST00000586486 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.73□□□□□ -0.53
PRKCSH-203ENST00000586486 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
PRKCSH-203ENST00000586486 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
PRKCSH-203ENST00000586486 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
PRKCSH-203ENST00000586486 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
PRKCSH-203ENST00000586486 TMEM70Q9BUB7 260 aa11.72□□□□□ -0.53
PRKCSH-203ENST00000586486 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.53
PRKCSH-203ENST00000586486 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
PRKCSH-203ENST00000586486 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.54
PRKCSH-203ENST00000586486 PRSS47A8MTI9 375 aa11.71□□□□□ -0.54
PRKCSH-203ENST00000586486 LYPD5Q6UWN5 251 aa11.71□□□□□ -0.54
PRKCSH-203ENST00000586486 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.54
PRKCSH-203ENST00000586486 ESRGQ1W209 222 aa11.7□□□□□ -0.54
PRKCSH-203ENST00000586486 TMEM97Q5BJF2 176 aa11.7□□□□□ -0.54
PRKCSH-203ENST00000586486 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
PRKCSH-203ENST00000586486 CCL18P55774 89 aa11.69□□□□□ -0.54
PRKCSH-203ENST00000586486 I3L3M4 83 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 VCYO14598 125 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 SMIM2Q9BVW6 85 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 TRGC2P03986 189 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 LELP1Q5T871 98 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 LINC00588Q9Y4M8 146 aa11.68□□□□□ -0.54
PRKCSH-203ENST00000586486 COTL1Q14019 142 aa11.67□□□□□ -0.54
PRKCSH-203ENST00000586486 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
PRKCSH-203ENST00000586486 PMCHP20382 165 aa11.66□□□□□ -0.54
PRKCSH-203ENST00000586486 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
PRKCSH-203ENST00000586486 UPK3BQ9BT76 320 aa11.66□□□□□ -0.54
PRKCSH-203ENST00000586486 TSHBP01222 138 aa11.65□□□□□ -0.54
PRKCSH-203ENST00000586486 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
PRKCSH-203ENST00000586486 LGALS9CQ6DKI2 356 aa11.65□□□□□ -0.54
PRKCSH-203ENST00000586486 KIR2DL4Q99706 377 aa11.65□□□□□ -0.54
PRKCSH-203ENST00000586486 IGLV2-18A0A075B6J9 118 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 TRBV25-1A0A075B6N4 114 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 TCAPO15273 167 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 Q8N8P6 123 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 C18orf32Q8TCD1 76 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 LYSTQ99698 3801 aa11.64□□□□□ -0.55
PRKCSH-203ENST00000586486 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
PRKCSH-203ENST00000586486 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms