RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 PROK2Q9HC23 129 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
PPP4R1-227ENST00000583988 MUC22E2RYF6 1773 aaPredicted RBP0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 CACNA1HO95180 2353 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 TMEM14DPA8MWL7 114 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 UBE2D1P51668 147 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 EDDM3BP56851 147 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 S100A7L2Q5SY68 101 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 C12orf73Q69YU5 71 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 DPH3Q96FX2 82 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 NAIPQ13075 1403 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 TNCP24821 2201 aa0.37□□□□□ -2.35
PPP4R1-227ENST00000583988 UNC13BO14795 1591 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 IBTKQ9P2D0 1353 aaPredicted RBP0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 GCHFRP30047 84 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 CCL8P80075 99 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 COX6A2Q02221 97 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 C1orf54Q8WWF1 131 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 LINC00470Q9BZP3 86 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 BICRAQ9NZM4 1560 aa0.36□□□□□ -2.35
PPP4R1-227ENST00000583988 NWD2Q9ULI1 1742 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 IFT140Q96RY7 1462 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 LRRC37A3O60309 1634 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 PTPRZ1P23471 2315 aaPredicted RBP0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 TRGV1A0A0A0MS02 117 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 NDUFA2O43678 99 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 INSL4Q14641 139 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 Q6ZRX8 168 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 Q96NJ1 140 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 AQP10Q96PS8 301 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 SNRNP25Q9BV90 132 aaKnown RBP0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 RERGLQ9H628 205 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 NAA60Q9H7X0 242 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 ARFGEF1Q9Y6D6 1849 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 CFTRP13569 1480 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 TTC28Q96AY4 2481 aa0.35□□□□□ -2.35
PPP4R1-227ENST00000583988 TPRP12270 2363 aaKnown RBP0.34□□□□□ -2.35
PPP4R1-227ENST00000583988 NMBP08949 121 aa0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 HIST1H1DP16402 221 aaKnown RBP0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 SARNPP82979 210 aaKnown RBP0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 BAGE3Q86Y29 109 aa0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 AGPAT4-IT1Q9H0P7 198 aa0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 LINC00312Q9Y6C7 94 aa0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 MYH7P12883 1935 aa0.34□□□□□ -2.36
PPP4R1-227ENST00000583988 MEGF8Q7Z7M0 2845 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 MYH8P13535 1937 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 SIPA1L3O60292 1781 aaPredicted RBP0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 TRAV13-2A0A0B4J235 113 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 TRAV1-2A0A0B4J238 106 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 K7EP13 123 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 PIN1P1O15428 100 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 GNG7O60262 68 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 Q6AWC8 147 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 WFDC6Q9BQY6 131 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 SERP1Q9Y6X1 66 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 ABCA12Q86UK0 2595 aa0.33□□□□□ -2.36
PPP4R1-227ENST00000583988 CASKIN1Q8WXD9 1431 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 SIX6O95475 246 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 MEIG1Q5JSS6 88 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 UBE2DNLQ8IWF7 75 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 FAM213BQ8TBF2 198 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 KRTAP2-1Q9BYU5 128 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 R4GMQ9 66 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 PXDNQ92626 1479 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
PPP4R1-227ENST00000583988 CLPSL1A2RUU4 121 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 EFCAB10A6NFE3 127 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 HCG22E2RYF7 251 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 SPINK1P00995 79 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 FGF7P21781 194 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 BTG2P78543 158 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 RBM3P98179 157 aaKnown RBP0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 Q5VV11 94 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 PPP3R2Q96LZ3 170 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 F8P00451 2351 aa0.31□□□□□ -2.36
PPP4R1-227ENST00000583988 SPAARA0A1B0GVQ0 90 aa0.3□□□□□ -2.36
PPP4R1-227ENST00000583988 PPP1R17O96001 155 aa0.3□□□□□ -2.36
PPP4R1-227ENST00000583988 PI4KAP42356 2102 aa0.3□□□□□ -2.36
PPP4R1-227ENST00000583988 Q56UQ5 140 aa0.3□□□□□ -2.36
PPP4R1-227ENST00000583988 C10orf128Q5T292 105 aa0.3□□□□□ -2.36
PPP4R1-227ENST00000583988 GOLGA3Q08378 1498 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 MIF4GDA9UHW6 222 aaKnown RBP0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 IFNGP01579 166 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 APOC2P02655 101 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 Q5BKY6 102 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 CFAP126Q5VTH2 177 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 RPL13AP3Q6NVV1 102 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 TTC9CQ8N5M4 171 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 Q8N8P6 123 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 SMIM4Q8WVI0 70 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 NPVFQ9HCQ7 196 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 LENEPQ9Y5L5 61 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 IGF2RP11717 2491 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 PHLPP1O60346 1717 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms