RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
CTDNEP1-211ENST00000575783 F5H697 171 aa10.06□□□□□ -0.8
CTDNEP1-211ENST00000575783 Q6ZRP5 223 aa10.06□□□□□ -0.8
CTDNEP1-211ENST00000575783 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
CTDNEP1-211ENST00000575783 VAX2Q9UIW0 290 aa10.06□□□□□ -0.8
CTDNEP1-211ENST00000575783 GZMBP10144 247 aa10.05□□□□□ -0.8
CTDNEP1-211ENST00000575783 RPL12P30050 165 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-211ENST00000575783 HIGD2BQ4VC39 106 aa10.05□□□□□ -0.8
CTDNEP1-211ENST00000575783 FAM162BQ5T6X4 162 aa10.05□□□□□ -0.8
CTDNEP1-211ENST00000575783 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
CTDNEP1-211ENST00000575783 A0A096LNI7 61 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 IGHV1-24A0A0C4DH33 117 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 CYCSP99999 105 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 Q86TA4 180 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
CTDNEP1-211ENST00000575783 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
CTDNEP1-211ENST00000575783 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
CTDNEP1-211ENST00000575783 IQCJQ1A5X6 159 aa10.03□□□□□ -0.8
CTDNEP1-211ENST00000575783 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.81
CTDNEP1-211ENST00000575783 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 A6NHS1 94 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 PEX7O00628 323 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 CXorf1O96002 111 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 SULT1A2P50226 295 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 DEFA3P59666 94 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 SSTP61278 116 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
CTDNEP1-211ENST00000575783 A0A1W2PRE2 83 aa10□□□□□ -0.81
CTDNEP1-211ENST00000575783 MPC2O95563 127 aa10□□□□□ -0.81
CTDNEP1-211ENST00000575783 AQP10Q96PS8 301 aa10□□□□□ -0.81
CTDNEP1-211ENST00000575783 ZNF471Q9BX82 626 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-211ENST00000575783 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
CTDNEP1-211ENST00000575783 TRAV26-2A0A0B4J265 109 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 IGKV3OR2-268A0A0C4DH90 116 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 A0A1B0GUV1 79 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 H2BFSP57053 126 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 UBE2G2P60604 165 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 ZNF674Q2M3X9 581 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 ZFP30Q9Y2G7 519 aa9.99□□□□□ -0.81
CTDNEP1-211ENST00000575783 PET100P0DJ07 73 aa9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 PRR4Q16378 134 aa9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 COX8CQ7Z4L0 72 aa9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
CTDNEP1-211ENST00000575783 CACNG7P62955 275 aa9.97□□□□□ -0.81
CTDNEP1-211ENST00000575783 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
CTDNEP1-211ENST00000575783 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
CTDNEP1-211ENST00000575783 ACTR3CQ9C0K3 210 aaPredicted RBP9.97□□□□□ -0.81
CTDNEP1-211ENST00000575783 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
CTDNEP1-211ENST00000575783 HIST1H2BAQ96A08 127 aa9.96□□□□□ -0.82
CTDNEP1-211ENST00000575783 MBP02144 154 aa9.95□□□□□ -0.82
CTDNEP1-211ENST00000575783 ATP6V0CP27449 155 aa9.95□□□□□ -0.82
CTDNEP1-211ENST00000575783 UBE2G1P62253 170 aa9.95□□□□□ -0.82
CTDNEP1-211ENST00000575783 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
CTDNEP1-211ENST00000575783 UBE2L6O14933 153 aa9.94□□□□□ -0.82
CTDNEP1-211ENST00000575783 FMC1Q96HJ9 113 aa9.94□□□□□ -0.82
CTDNEP1-211ENST00000575783 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-211ENST00000575783 FAM74A7A6NL05 159 aa9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 MGPP08493 103 aa9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-211ENST00000575783 M0QY20 66 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 LTAP01374 205 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 MT-ND6P03923 174 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 SERF2P84101 59 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 NKX6-2Q9C056 277 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 TNFSF18Q9UNG2 199 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
CTDNEP1-211ENST00000575783 SNAI2O43623 268 aa9.9□□□□□ -0.82
CTDNEP1-211ENST00000575783 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
CTDNEP1-211ENST00000575783 SSBP4Q9BWG4 385 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-211ENST00000575783 SSNA1O43805 119 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 OR5AL1P0C617 328 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 CCDC32Q9BV29 185 aa9.89□□□□□ -0.83
CTDNEP1-211ENST00000575783 AMTP48728 403 aa9.88□□□□□ -0.83
CTDNEP1-211ENST00000575783 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
CTDNEP1-211ENST00000575783 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
CTDNEP1-211ENST00000575783 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
CTDNEP1-211ENST00000575783 CXCL1P09341 107 aa9.87□□□□□ -0.83
CTDNEP1-211ENST00000575783 FSIP2Q5CZC0 6907 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 INMT-MINDY4F8WBC2 141 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 FOXI1Q12951 378 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 COTL1Q14019 142 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 FER1L6-AS1Q8NA97 138 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms