RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 FER1L6-AS1Q8NA97 138 aa17.25■□□□□ 0.35
NPLOC4-215ENST00000574095 SMIM12Q96EX1 92 aa17.25■□□□□ 0.35
NPLOC4-215ENST00000574095 AP1S3Q96PC3 154 aa17.25■□□□□ 0.35
NPLOC4-215ENST00000574095 TRBV6-8A0A0A6YYG3 113 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 TMEM262E9PQX1 116 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 KCNIP4Q6PIL6 250 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 AKAP14Q86UN6 197 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 C9orf62Q8N4C0 152 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 BAALCQ8WXS3 180 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 UBE2WQ96B02 151 aa17.24■□□□□ 0.35
NPLOC4-215ENST00000574095 IGKV2D-24A0A075B6R9 120 aa17.23■□□□□ 0.35
NPLOC4-215ENST00000574095 HAMPP81172 84 aa17.23■□□□□ 0.35
NPLOC4-215ENST00000574095 CHCHD7Q9BUK0 85 aa17.23■□□□□ 0.35
NPLOC4-215ENST00000574095 P01737 135 aa17.22■□□□□ 0.35
NPLOC4-215ENST00000574095 ELOBQ15370 118 aa17.22■□□□□ 0.35
NPLOC4-215ENST00000574095 RMI2Q96E14 147 aa17.22■□□□□ 0.35
NPLOC4-215ENST00000574095 COX11Q9Y6N1 276 aa17.22■□□□□ 0.35
NPLOC4-215ENST00000574095 SMR3BP02814 79 aaPredicted RBP17.2■□□□□ 0.34
NPLOC4-215ENST00000574095 MGPP08493 103 aa17.2■□□□□ 0.34
NPLOC4-215ENST00000574095 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.2■□□□□ 0.34
NPLOC4-215ENST00000574095 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.19■□□□□ 0.34
NPLOC4-215ENST00000574095 XKRY2A2RUG3 117 aa17.19■□□□□ 0.34
NPLOC4-215ENST00000574095 CACNG7P62955 275 aa17.19■□□□□ 0.34
NPLOC4-215ENST00000574095 TMEM70Q9BUB7 260 aa17.19■□□□□ 0.34
NPLOC4-215ENST00000574095 BIN3Q9NQY0 253 aa17.19■□□□□ 0.34
NPLOC4-215ENST00000574095 TAGLN2P37802 199 aaKnown RBP17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 LYZL1Q6UWQ5 148 aa17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 NTM-AS1Q6ZSK4 140 aa17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 NUDT10Q8NFP7 164 aa17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 NUDT11Q96G61 164 aa17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 CHCHD5Q9BSY4 110 aa17.18■□□□□ 0.34
NPLOC4-215ENST00000574095 MPV17L2Q567V2 206 aa17.17■□□□□ 0.34
NPLOC4-215ENST00000574095 Q5VSD8 79 aa17.17■□□□□ 0.34
NPLOC4-215ENST00000574095 ALKAL2Q6UX46 152 aa17.17■□□□□ 0.34
NPLOC4-215ENST00000574095 FAM30AQ9NZY2 134 aa17.17■□□□□ 0.34
NPLOC4-215ENST00000574095 F2Z2F3 143 aa17.16■□□□□ 0.34
NPLOC4-215ENST00000574095 M0QY20 66 aa17.16■□□□□ 0.34
NPLOC4-215ENST00000574095 C15orf54Q8N8G6 183 aa17.16■□□□□ 0.34
NPLOC4-215ENST00000574095 FRZBQ92765 325 aa17.16■□□□□ 0.34
NPLOC4-215ENST00000574095 Q0VG73 95 aa17.15■□□□□ 0.34
NPLOC4-215ENST00000574095 SUMO4Q6EEV6 95 aa17.15■□□□□ 0.34
NPLOC4-215ENST00000574095 ENHOQ6UWT2 76 aa17.15■□□□□ 0.34
NPLOC4-215ENST00000574095 OCC1Q8TAD7 63 aa17.15■□□□□ 0.34
NPLOC4-215ENST00000574095 NTF3P20783 257 aa17.14■□□□□ 0.33
NPLOC4-215ENST00000574095 TMEM97Q5BJF2 176 aa17.14■□□□□ 0.33
NPLOC4-215ENST00000574095 ATRAIDQ6UW56 229 aa17.14■□□□□ 0.33
NPLOC4-215ENST00000574095 K7EN84 100 aa17.13■□□□□ 0.33
NPLOC4-215ENST00000574095 ANGP03950 147 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-215ENST00000574095 Q8N976 141 aa17.13■□□□□ 0.33
NPLOC4-215ENST00000574095 RNASE7Q9H1E1 156 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-215ENST00000574095 H7C1H1 209 aa17.12■□□□□ 0.33
NPLOC4-215ENST00000574095 CRPP02741 224 aa17.12■□□□□ 0.33
NPLOC4-215ENST00000574095 BLOC1S1P78537 153 aa17.12■□□□□ 0.33
NPLOC4-215ENST00000574095 TRGC1P0CF51 173 aa17.11■□□□□ 0.33
NPLOC4-215ENST00000574095 GAGE6Q13070 117 aa17.11■□□□□ 0.33
NPLOC4-215ENST00000574095 C1orf43Q9BWL3 253 aa17.11■□□□□ 0.33
NPLOC4-215ENST00000574095 VPS13BQ7Z7G8 4022 aa17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 TRBV25-1A0A075B6N4 114 aa17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 NKX2-5P52952 324 aaPredicted RBP17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 PKIAP61925 76 aa17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 LINC01620Q4KN68 170 aa17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 DPH3P1Q9H4G8 78 aa17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 RPP21Q9H633 154 aaKnown RBP17.1■□□□□ 0.33
NPLOC4-215ENST00000574095 INAFM2P0DMQ5 153 aa17.09■□□□□ 0.33
NPLOC4-215ENST00000574095 CTRLP40313 264 aa17.09■□□□□ 0.33
NPLOC4-215ENST00000574095 RASL11AQ6T310 242 aa17.09■□□□□ 0.33
NPLOC4-215ENST00000574095 RBX1P62877 108 aa17.08■□□□□ 0.32
NPLOC4-215ENST00000574095 TWIST1Q15672 202 aa17.08■□□□□ 0.32
NPLOC4-215ENST00000574095 WDR73Q6P4I2 378 aa17.08■□□□□ 0.32
NPLOC4-215ENST00000574095 IQCJQ1A5X6 159 aa17.07■□□□□ 0.32
NPLOC4-215ENST00000574095 LYPD6BQ8NI32 183 aa17.07■□□□□ 0.32
NPLOC4-215ENST00000574095 IGHV1-24A0A0C4DH33 117 aa17.06■□□□□ 0.32
NPLOC4-215ENST00000574095 TMEM250H0YL14 139 aa17.06■□□□□ 0.32
NPLOC4-215ENST00000574095 FAM229AH3BQW9 127 aa17.06■□□□□ 0.32
NPLOC4-215ENST00000574095 CLPSL2Q6UWE3 100 aa17.06■□□□□ 0.32
NPLOC4-215ENST00000574095 DEFB104AQ8WTQ1 72 aa17.06■□□□□ 0.32
NPLOC4-215ENST00000574095 CEBPGP53567 150 aa17.05■□□□□ 0.32
NPLOC4-215ENST00000574095 CNFNQ9BYD5 112 aa17.05■□□□□ 0.32
NPLOC4-215ENST00000574095 NIT2Q9NQR4 276 aa17.05■□□□□ 0.32
NPLOC4-215ENST00000574095 MIAQ16674 131 aa17.04■□□□□ 0.32
NPLOC4-215ENST00000574095 Q6ZSA8 131 aa17.04■□□□□ 0.32
NPLOC4-215ENST00000574095 LINC00269Q8N2A0 174 aa17.04■□□□□ 0.32
NPLOC4-215ENST00000574095 GTSF1Q8WW33 167 aa17.04■□□□□ 0.32
NPLOC4-215ENST00000574095 GATCO43716 136 aaKnown RBP17.02■□□□□ 0.32
NPLOC4-215ENST00000574095 HLA-DQA1P01909 254 aa17.02■□□□□ 0.32
NPLOC4-215ENST00000574095 PRR34Q9NV39 138 aa17.02■□□□□ 0.32
NPLOC4-215ENST00000574095 A0A1B0GVG6 124 aa17.01■□□□□ 0.31
NPLOC4-215ENST00000574095 TMEM243Q9BU79 118 aa17■□□□□ 0.31
NPLOC4-215ENST00000574095 EIF5A2Q9GZV4 153 aaKnown RBP17■□□□□ 0.31
NPLOC4-215ENST00000574095 TRAV26-2A0A0B4J265 109 aa16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 FOXA3P55318 350 aaPredicted RBP16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 C14orf177Q52M58 125 aa16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 FAM231DQ6ZW35 169 aa16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 GATD1Q8NB37 220 aa16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 PGLYRP4Q96LB8 373 aa16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 SRRM2Q9UQ35 2752 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-215ENST00000574095 USP17L23D6RBM5 183 aa16.98■□□□□ 0.31
NPLOC4-215ENST00000574095 C20orf203Q8NBC4 194 aa16.98■□□□□ 0.31
NPLOC4-215ENST00000574095 REG3AQ06141 175 aa16.97■□□□□ 0.31
NPLOC4-215ENST00000574095 KRTAP26-1Q6PEX3 210 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms