RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 KCNIP4Q6PIL6 250 aa20.12■□□□□ 0.81
CTDNEP1-206ENST00000571409 C9orf62Q8N4C0 152 aa20.12■□□□□ 0.81
CTDNEP1-206ENST00000571409 TRBV6-8A0A0A6YYG3 113 aa20.11■□□□□ 0.81
CTDNEP1-206ENST00000571409 DNAJC30Q96LL9 226 aa20.11■□□□□ 0.81
CTDNEP1-206ENST00000571409 COX11Q9Y6N1 276 aa20.11■□□□□ 0.81
CTDNEP1-206ENST00000571409 LECT2O14960 151 aa20.1■□□□□ 0.81
CTDNEP1-206ENST00000571409 P01737 135 aa20.1■□□□□ 0.81
CTDNEP1-206ENST00000571409 RMI2Q96E14 147 aa20.1■□□□□ 0.81
CTDNEP1-206ENST00000571409 EPM2AB3EWF7 344 aa20.09■□□□□ 0.81
CTDNEP1-206ENST00000571409 TAGLN2P37802 199 aaKnown RBP20.09■□□□□ 0.81
CTDNEP1-206ENST00000571409 ELOBQ15370 118 aa20.09■□□□□ 0.81
CTDNEP1-206ENST00000571409 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.09■□□□□ 0.81
CTDNEP1-206ENST00000571409 XKRY2A2RUG3 117 aa20.08■□□□□ 0.81
CTDNEP1-206ENST00000571409 UBE2WQ96B02 151 aa20.08■□□□□ 0.81
CTDNEP1-206ENST00000571409 BIN3Q9NQY0 253 aa20.08■□□□□ 0.81
CTDNEP1-206ENST00000571409 IGKV2D-24A0A075B6R9 120 aa20.07■□□□□ 0.8
CTDNEP1-206ENST00000571409 TMEM262E9PQX1 116 aa20.07■□□□□ 0.8
CTDNEP1-206ENST00000571409 MGPP08493 103 aa20.06■□□□□ 0.8
CTDNEP1-206ENST00000571409 CACNG7P62955 275 aa20.06■□□□□ 0.8
CTDNEP1-206ENST00000571409 BAALCQ8WXS3 180 aa20.06■□□□□ 0.8
CTDNEP1-206ENST00000571409 TMEM70Q9BUB7 260 aa20.04■□□□□ 0.8
CTDNEP1-206ENST00000571409 F2Z2F3 143 aa20.03■□□□□ 0.8
CTDNEP1-206ENST00000571409 HAMPP81172 84 aa20.03■□□□□ 0.8
CTDNEP1-206ENST00000571409 ALKAL2Q6UX46 152 aa20.03■□□□□ 0.8
CTDNEP1-206ENST00000571409 CHCHD5Q9BSY4 110 aa20.03■□□□□ 0.8
CTDNEP1-206ENST00000571409 MPV17L2Q567V2 206 aa20.02■□□□□ 0.8
CTDNEP1-206ENST00000571409 TMEM97Q5BJF2 176 aa20.02■□□□□ 0.8
CTDNEP1-206ENST00000571409 LYZL1Q6UWQ5 148 aa20.02■□□□□ 0.8
CTDNEP1-206ENST00000571409 NUDT10Q8NFP7 164 aa20.02■□□□□ 0.8
CTDNEP1-206ENST00000571409 NUDT11Q96G61 164 aa20.02■□□□□ 0.8
CTDNEP1-206ENST00000571409 IGLV2-33A0A075B6J2 118 aaPredicted RBP20.01■□□□□ 0.79
CTDNEP1-206ENST00000571409 Q0VG73 95 aa20.01■□□□□ 0.79
CTDNEP1-206ENST00000571409 NTM-AS1Q6ZSK4 140 aa20.01■□□□□ 0.79
CTDNEP1-206ENST00000571409 FRZBQ92765 325 aa20.01■□□□□ 0.79
CTDNEP1-206ENST00000571409 M0QY20 66 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 BLOC1S1P78537 153 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 Q5VSD8 79 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 SUMO4Q6EEV6 95 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 ATRAIDQ6UW56 229 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 C15orf54Q8N8G6 183 aa20■□□□□ 0.79
CTDNEP1-206ENST00000571409 H7C1H1 209 aa19.99■□□□□ 0.79
CTDNEP1-206ENST00000571409 SMR3BP02814 79 aaPredicted RBP19.99■□□□□ 0.79
CTDNEP1-206ENST00000571409 TRGC1P0CF51 173 aa19.99■□□□□ 0.79
CTDNEP1-206ENST00000571409 K7EN84 100 aa19.98■□□□□ 0.79
CTDNEP1-206ENST00000571409 PKIAP61925 76 aa19.98■□□□□ 0.79
CTDNEP1-206ENST00000571409 ENHOQ6UWT2 76 aa19.98■□□□□ 0.79
CTDNEP1-206ENST00000571409 CRPP02741 224 aa19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 ANGP03950 147 aaKnown RBP19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 NTF3P20783 257 aa19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 OCC1Q8TAD7 63 aa19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 RNASE7Q9H1E1 156 aaKnown RBP19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 FAM30AQ9NZY2 134 aa19.97■□□□□ 0.79
CTDNEP1-206ENST00000571409 CTRLP40313 264 aa19.96■□□□□ 0.79
CTDNEP1-206ENST00000571409 Q8N976 141 aa19.96■□□□□ 0.79
CTDNEP1-206ENST00000571409 C1orf43Q9BWL3 253 aa19.96■□□□□ 0.79
CTDNEP1-206ENST00000571409 DPH3P1Q9H4G8 78 aa19.96■□□□□ 0.79
CTDNEP1-206ENST00000571409 RPP21Q9H633 154 aaKnown RBP19.96■□□□□ 0.79
CTDNEP1-206ENST00000571409 TRBV25-1A0A075B6N4 114 aa19.95■□□□□ 0.78
CTDNEP1-206ENST00000571409 WDR73Q6P4I2 378 aa19.94■□□□□ 0.78
CTDNEP1-206ENST00000571409 TMEM250H0YL14 139 aa19.93■□□□□ 0.78
CTDNEP1-206ENST00000571409 NKX2-5P52952 324 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-206ENST00000571409 GAGE6Q13070 117 aa19.93■□□□□ 0.78
CTDNEP1-206ENST00000571409 RASL11AQ6T310 242 aa19.93■□□□□ 0.78
CTDNEP1-206ENST00000571409 LYPD6BQ8NI32 183 aa19.93■□□□□ 0.78
CTDNEP1-206ENST00000571409 IQCJQ1A5X6 159 aa19.92■□□□□ 0.78
CTDNEP1-206ENST00000571409 IGHV1-24A0A0C4DH33 117 aa19.91■□□□□ 0.78
CTDNEP1-206ENST00000571409 TWIST1Q15672 202 aa19.91■□□□□ 0.78
CTDNEP1-206ENST00000571409 CNFNQ9BYD5 112 aa19.91■□□□□ 0.78
CTDNEP1-206ENST00000571409 RBX1P62877 108 aa19.9■□□□□ 0.78
CTDNEP1-206ENST00000571409 INAFM2P0DMQ5 153 aa19.89■□□□□ 0.77
CTDNEP1-206ENST00000571409 FAT1Q14517 4588 aa19.89■□□□□ 0.77
CTDNEP1-206ENST00000571409 LINC01620Q4KN68 170 aa19.89■□□□□ 0.77
CTDNEP1-206ENST00000571409 NIT2Q9NQR4 276 aa19.89■□□□□ 0.77
CTDNEP1-206ENST00000571409 FAM229AH3BQW9 127 aa19.88■□□□□ 0.77
CTDNEP1-206ENST00000571409 CEBPGP53567 150 aa19.88■□□□□ 0.77
CTDNEP1-206ENST00000571409 MIAQ16674 131 aa19.88■□□□□ 0.77
CTDNEP1-206ENST00000571409 Q6ZSA8 131 aa19.88■□□□□ 0.77
CTDNEP1-206ENST00000571409 CLPSL2Q6UWE3 100 aa19.87■□□□□ 0.77
CTDNEP1-206ENST00000571409 LINC00269Q8N2A0 174 aa19.86■□□□□ 0.77
CTDNEP1-206ENST00000571409 GTSF1Q8WW33 167 aa19.86■□□□□ 0.77
CTDNEP1-206ENST00000571409 PRR34Q9NV39 138 aa19.86■□□□□ 0.77
CTDNEP1-206ENST00000571409 DNAH8Q96JB1 4490 aa19.85■□□□□ 0.77
CTDNEP1-206ENST00000571409 GATCO43716 136 aaKnown RBP19.85■□□□□ 0.77
CTDNEP1-206ENST00000571409 HLA-DQA1P01909 254 aa19.84■□□□□ 0.77
CTDNEP1-206ENST00000571409 C14orf177Q52M58 125 aa19.84■□□□□ 0.77
CTDNEP1-206ENST00000571409 FAM231DQ6ZW35 169 aa19.84■□□□□ 0.77
CTDNEP1-206ENST00000571409 EIF5A2Q9GZV4 153 aaKnown RBP19.84■□□□□ 0.77
CTDNEP1-206ENST00000571409 VPS13BQ7Z7G8 4022 aa19.84■□□□□ 0.77
CTDNEP1-206ENST00000571409 DEFB104AQ8WTQ1 72 aa19.83■□□□□ 0.77
CTDNEP1-206ENST00000571409 PGLYRP4Q96LB8 373 aa19.83■□□□□ 0.77
CTDNEP1-206ENST00000571409 TMEM243Q9BU79 118 aa19.83■□□□□ 0.77
CTDNEP1-206ENST00000571409 A0A1B0GVG6 124 aa19.82■□□□□ 0.76
CTDNEP1-206ENST00000571409 TRAV26-2A0A0B4J265 109 aa19.81■□□□□ 0.76
CTDNEP1-206ENST00000571409 GATD1Q8NB37 220 aa19.81■□□□□ 0.76
CTDNEP1-206ENST00000571409 A8MWL6 223 aa19.8■□□□□ 0.76
CTDNEP1-206ENST00000571409 SMIM15Q7Z3B0 74 aa19.8■□□□□ 0.76
CTDNEP1-206ENST00000571409 USP17L23D6RBM5 183 aa19.79■□□□□ 0.76
CTDNEP1-206ENST00000571409 FAM210AQ96ND0 272 aa19.79■□□□□ 0.76
CTDNEP1-206ENST00000571409 SMIM7Q9BQ49 75 aa19.79■□□□□ 0.76
CTDNEP1-206ENST00000571409 REG3AQ06141 175 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms