RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CRYBA4P53673 196 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 RAB5BP61020 215 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 NIT2Q9NQR4 276 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 PAX4O43316 350 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 IQCJQ1A5X6 159 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
HERPUD1-219ENST00000570273 STAB2Q8WWQ8 2551 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 TRAV26-1A0A087WT03 109 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 DEFB131BA0A096LNP1 70 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 TRAV10A0A0B4J240 114 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 A0A0J9YY99 117 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BKO60814 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BJP06899 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BOP23527 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BBP33778 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BDP58876 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BCP62807 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST2H2BEQ16778 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BHQ93079 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BNQ99877 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 HIST1H2BMQ99879 126 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
HERPUD1-219ENST00000570273 TRBV6-5A0A0K0K1A5 114 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 RPL36AP83881 106 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 GAGE1Q13065 139 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 GAGE4Q13068 117 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 GAGE5Q13069 117 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 RPL36ALQ969Q0 106 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 DNAJC30Q96LL9 226 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 C20orf78Q9BR46 151 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 Q9UF83 564 aa10.82□□□□□ -0.68
HERPUD1-219ENST00000570273 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
HERPUD1-219ENST00000570273 GYPEP15421 78 aa10.81□□□□□ -0.68
HERPUD1-219ENST00000570273 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
HERPUD1-219ENST00000570273 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
HERPUD1-219ENST00000570273 VSIG2Q96IQ7 327 aa10.8□□□□□ -0.68
HERPUD1-219ENST00000570273 SMIM2Q9BVW6 85 aa10.8□□□□□ -0.68
HERPUD1-219ENST00000570273 TMA7Q9Y2S6 64 aaKnown RBP10.8□□□□□ -0.68
HERPUD1-219ENST00000570273 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
HERPUD1-219ENST00000570273 PMCHP20382 165 aa10.79□□□□□ -0.68
HERPUD1-219ENST00000570273 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
HERPUD1-219ENST00000570273 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
HERPUD1-219ENST00000570273 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
HERPUD1-219ENST00000570273 RPL32P62910 135 aaKnown RBP10.78□□□□□ -0.68
HERPUD1-219ENST00000570273 Q0VG73 95 aa10.78□□□□□ -0.68
HERPUD1-219ENST00000570273 PRSS3P2Q8NHM4 247 aa10.78□□□□□ -0.68
HERPUD1-219ENST00000570273 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-219ENST00000570273 LINC00694P0DN24 101 aa10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 POLR2KP53803 58 aaKnown RBP10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 UBE2D3P61077 147 aa10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 UBE2D2P62837 147 aa10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 FA2HQ7L5A8 372 aa10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 NXT2Q9NPJ8 142 aaKnown RBP10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.68
HERPUD1-219ENST00000570273 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 VCYO14598 125 aa10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 NDUFA6P56556 154 aa10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 RNASEKQ6P5S7 137 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 Q8N8P6 123 aa10.76□□□□□ -0.69
HERPUD1-219ENST00000570273 I3L3M4 83 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 A0A096LPF7 62 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 TRBV27A0A0K0K1C4 114 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 H3BNG1 76 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 NIT1Q86X76 327 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 DEFB104AQ8WTQ1 72 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 KIR2DL4Q99706 377 aa10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-219ENST00000570273 TCAPO15273 167 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 SERF1AO75920 110 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 NUDT3O95989 172 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 S100A6P06703 90 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 FCER1GP30273 86 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 COTL1Q14019 142 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
HERPUD1-219ENST00000570273 TSHBP01222 138 aa10.73□□□□□ -0.69
HERPUD1-219ENST00000570273 LINC00614P0C842 121 aa10.73□□□□□ -0.69
HERPUD1-219ENST00000570273 AP5S1Q9NUS5 200 aa10.73□□□□□ -0.69
HERPUD1-219ENST00000570273 IGLL5B9A064 214 aa10.72□□□□□ -0.69
HERPUD1-219ENST00000570273 LINC00310P59036 64 aa10.72□□□□□ -0.69
HERPUD1-219ENST00000570273 SH2D6Q7Z4S9 175 aa10.72□□□□□ -0.69
HERPUD1-219ENST00000570273 CHCHD1Q96BP2 118 aaKnown RBP10.72□□□□□ -0.69
HERPUD1-219ENST00000570273 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
HERPUD1-219ENST00000570273 LAGE3Q14657 143 aa10.71□□□□□ -0.69
HERPUD1-219ENST00000570273 COA6Q5JTJ3 125 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-219ENST00000570273 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms