RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 NACAE9PAV3 2078 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 IFITM10A6NMD0 228 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 B4DEV8 164 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 E9PLD3 99 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 GABARAPH6UMI1 98 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 OR10J1P30954 320 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 NDUFV3P56181 108 aaKnown RBP4.38□□□□□ -1.71
LINC00556-201ENST00000569603 CMC4P56277 68 aaPredicted RBP4.38□□□□□ -1.71
LINC00556-201ENST00000569603 SPINK9Q5DT21 86 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 LINC00242Q5T6M2 205 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 PGLYRP4Q96LB8 373 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 LINC01587Q99440 93 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 IMUPQ9GZP8 106 aa4.38□□□□□ -1.71
LINC00556-201ENST00000569603 WDR61Q9GZS3 305 aaKnown RBP4.38□□□□□ -1.71
LINC00556-201ENST00000569603 IGHV4-28A0A0C4DH34 117 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 DEFB4AO15263 64 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 CD3DP04234 171 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 IFITM1P13164 125 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 DEFB131AP59861 70 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 PRR3P79522 188 aaKnown RBP4.37□□□□□ -1.71
LINC00556-201ENST00000569603 KHDC3LQ587J8 217 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 ALKAL2Q6UX46 152 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 PRR15Q8IV56 129 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
LINC00556-201ENST00000569603 CACNG5Q9UF02 275 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
LINC00556-201ENST00000569603 IGKV3-7A0A075B6H7 116 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 C3orf85A0A1B0GTC6 90 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF705GA8MUZ8 300 aaPredicted RBP4.36□□□□□ -1.71
LINC00556-201ENST00000569603 ISLRO14498 428 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 GSTZ1O43708 216 aaPredicted RBP4.36□□□□□ -1.71
LINC00556-201ENST00000569603 OPRK1P41145 380 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
LINC00556-201ENST00000569603 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 STPG4Q8N801 248 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF431Q8TF32 576 aaPredicted RBP4.36□□□□□ -1.71
LINC00556-201ENST00000569603 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 CELA1Q9UNI1 258 aa4.36□□□□□ -1.71
LINC00556-201ENST00000569603 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
LINC00556-201ENST00000569603 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 C11orf94C9JXX5 98 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 H3BQ15 152 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 MIFP14174 115 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 NPPCP23582 126 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 HLA-DMBP28068 263 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 FOXA3P55318 350 aaPredicted RBP4.35□□□□□ -1.71
LINC00556-201ENST00000569603 YPEL3P61236 119 aaPredicted RBP4.35□□□□□ -1.71
LINC00556-201ENST00000569603 AKR1C1Q04828 323 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 SP6Q3SY56 376 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 NMSQ5H8A3 153 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 MORN3Q6PF18 240 aaPredicted RBP4.35□□□□□ -1.71
LINC00556-201ENST00000569603 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 Q6ZTC4 211 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 FXYD5Q96DB9 178 aa4.35□□□□□ -1.71
LINC00556-201ENST00000569603 IGKV1D-37A0A075B6S9 117 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 A0A1W2PS18 150 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF705FA8MVS1 300 aaPredicted RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 H3BMM0 161 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 SOCS3O14543 225 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 RTL8CO15255 209 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF688P0C7X2 276 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF705DP0CH99 300 aaPredicted RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF705BP0CI00 300 aaPredicted RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 SNCAP37840 140 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 INPP1P49441 399 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 HERVK_113P63121 156 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 SSBP1Q04837 148 aaKnown RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ERCC8Q13216 396 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 UFSP1Q6NVU6 142 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 MRPL54Q6P161 138 aaKnown RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 ZNF709Q8N972 641 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 C11orf72Q8NBR9 251 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 OR10J6PQ8NGY7 276 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 SMIM4Q8WVI0 70 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 GNPNAT1Q96EK6 184 aaPredicted RBP4.34□□□□□ -1.71
LINC00556-201ENST00000569603 KCNS1Q96KK3 526 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 RNF126Q9BV68 326 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 OTORQ9NRC9 128 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
LINC00556-201ENST00000569603 IGHV4-4A0A075B6R2 117 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 TRAV10A0A0B4J240 114 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 A0A0D9SG52 128 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 CRYM-AS1A6NIL9 109 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 A8MTW9 85 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 IGLL5B9A064 214 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 PSPHP1O15172 72 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 NMBP08949 121 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 SLC25A4P12235 298 aa4.33□□□□□ -1.72
LINC00556-201ENST00000569603 HLA-DRB4P13762 266 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms