RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MORN3Q6PF18 240 aaPredicted RBP5.12□□□□□ -1.59
SMG1-215ENST00000568239 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 IFI27L1Q96BM0 104 aa5.12□□□□□ -1.59
SMG1-215ENST00000568239 NOP10Q9NPE3 64 aaKnown RBP5.12□□□□□ -1.59
SMG1-215ENST00000568239 IGHV3-53P01767 116 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 PRSS1P07477 247 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 RNASE8Q8TDE3 154 aaKnown RBP5.11□□□□□ -1.59
SMG1-215ENST00000568239 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
SMG1-215ENST00000568239 M0QY20 66 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 P0DMU3 169 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 FAM231AP0DMU4 169 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 FAM231CP0DMU5 169 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 Q6ZTI0 123 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 KIR2DL4Q99706 377 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 LINC00467Q9BRT7 94 aa5.11□□□□□ -1.59
SMG1-215ENST00000568239 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 ORMDL2Q53FV1 153 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 PET117Q6UWS5 81 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 WFDC9Q8NEX5 89 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 H7C1H1 209 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 VCYO14598 125 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 OR4C5Q8NGB2 326 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 TRGV2A0A075B6R0 118 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 TNFRSF18Q9Y5U5 241 aa5.1□□□□□ -1.59
SMG1-215ENST00000568239 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 LINC01546A6NGU7 62 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 GAGE7O76087 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 GAGE12FP0CL80 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 GAGE12GP0CL81 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 GAGE12IP0CL82 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 DDTP30046 118 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 POLR2KP53803 58 aaKnown RBP5.09□□□□□ -1.59
SMG1-215ENST00000568239 TCTAP57738 103 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 SHISA2Q6UWI4 295 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 C2orf66Q6UXQ4 117 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 Q6ZSN1 163 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 Q9UF83 564 aa5.09□□□□□ -1.59
SMG1-215ENST00000568239 hDV102S1A0JD36 115 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 RHODO00212 210 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 DEFB135Q30KP9 77 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 ZNF479Q96JC4 524 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 SCGB3A1Q96QR1 104 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 PKD1L1Q8TDX9 2849 aa5.09□□□□□ -1.6
SMG1-215ENST00000568239 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.08□□□□□ -1.6
SMG1-215ENST00000568239 ATP5LO75964 103 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 ZFP2Q6ZN57 461 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 Q6ZN92 141 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 RIPPLY3P57055 190 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 PIK3CD-AS1Q5SR53 167 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 DKK2Q9UBU2 259 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 TP53TG1Q9Y2A0 90 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 NOTCH1P46531 2555 aa5.08□□□□□ -1.6
SMG1-215ENST00000568239 IGHV3-38A0A0C4DH36 116 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 KIR2DL5BA0A0G2JN68 375 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 KIR2DL5BA0A0G2JPC4 375 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 TRBV6-5A0A0K0K1A5 114 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 TRBV27A0A0K0K1C4 114 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 K7EMI3 77 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 RS1O15537 224 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 DEFB130BP0DP73 79 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 DEFB130AP0DP74 79 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 RPL39P62891 51 aaKnown RBP5.07□□□□□ -1.6
SMG1-215ENST00000568239 UFSP1Q6NVU6 142 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 KIR2DL5AQ8N109 375 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 PHLDA1Q8WV24 401 aaPredicted RBP5.07□□□□□ -1.6
SMG1-215ENST00000568239 PLAC8L1A1L4L8 177 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 I3L3M4 83 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 DEFB4AO15263 64 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 IGHV4-30-4P0DP06 118 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 APOC4P55056 127 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 DEFA6Q01524 100 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 PTH2Q96A98 100 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 TOMM6Q96B49 74 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 CYSLTR1Q9Y271 337 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 DAZ2Q13117 558 aaKnown RBP5.07□□□□□ -1.6
SMG1-215ENST00000568239 LGALS9BQ3B8N2 356 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 LGALS9CQ6DKI2 356 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
SMG1-215ENST00000568239 NEXN-AS1Q8NBZ9 246 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 ZNRF2Q8NHG8 242 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 TRAV4A0A0B4J268 109 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 G0S2P27469 103 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 RPL32P62910 135 aaKnown RBP5.06□□□□□ -1.6
SMG1-215ENST00000568239 STPG4Q8N801 248 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 OR11H2Q8NH07 326 aa5.06□□□□□ -1.6
SMG1-215ENST00000568239 TSHBP01222 138 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 ERASQ7Z444 233 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 MIEN1Q9BRT3 115 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 IGLC3P0DOY3 106 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 SLC25A29Q8N8R3 303 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms