RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
CCNF-203ENST00000564236 KANTRA0A1W2PQU2 76 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 RPL35P42766 123 aaKnown RBP10.9□□□□□ -0.66
CCNF-203ENST00000564236 KRTAP10-4P60372 401 aaPredicted RBP10.9□□□□□ -0.66
CCNF-203ENST00000564236 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 SPANXN1Q5VSR9 72 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.9□□□□□ -0.66
CCNF-203ENST00000564236 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 PRR34Q9NV39 138 aa10.9□□□□□ -0.66
CCNF-203ENST00000564236 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
CCNF-203ENST00000564236 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
CCNF-203ENST00000564236 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
CCNF-203ENST00000564236 A0A1B0GV50 99 aa10.88□□□□□ -0.67
CCNF-203ENST00000564236 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
CCNF-203ENST00000564236 MIAQ16674 131 aa10.88□□□□□ -0.67
CCNF-203ENST00000564236 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
CCNF-203ENST00000564236 AP1S3Q96PC3 154 aa10.88□□□□□ -0.67
CCNF-203ENST00000564236 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
CCNF-203ENST00000564236 CRPP02741 224 aa10.87□□□□□ -0.67
CCNF-203ENST00000564236 RAB5CP51148 216 aa10.87□□□□□ -0.67
CCNF-203ENST00000564236 C15orf54Q8N8G6 183 aa10.87□□□□□ -0.67
CCNF-203ENST00000564236 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
CCNF-203ENST00000564236 C19orf71A6NCJ1 209 aa10.86□□□□□ -0.67
CCNF-203ENST00000564236 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
CCNF-203ENST00000564236 CCL20P78556 96 aa10.86□□□□□ -0.67
CCNF-203ENST00000564236 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
CCNF-203ENST00000564236 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
CCNF-203ENST00000564236 CHCHD5Q9BSY4 110 aa10.86□□□□□ -0.67
CCNF-203ENST00000564236 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 F5H697 171 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 J3QL48 77 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 M0QY20 66 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 SMIM17P0DL12 118 aa10.85□□□□□ -0.67
CCNF-203ENST00000564236 RPS20P60866 119 aaKnown RBP10.85□□□□□ -0.67
CCNF-203ENST00000564236 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
CCNF-203ENST00000564236 RBX1P62877 108 aa10.84□□□□□ -0.67
CCNF-203ENST00000564236 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
CCNF-203ENST00000564236 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
CCNF-203ENST00000564236 GNG13Q9P2W3 67 aa10.84□□□□□ -0.67
CCNF-203ENST00000564236 USP17L23D6RBM5 183 aa10.83□□□□□ -0.68
CCNF-203ENST00000564236 H7C1H1 209 aa10.83□□□□□ -0.68
CCNF-203ENST00000564236 CACNG7P62955 275 aa10.83□□□□□ -0.68
CCNF-203ENST00000564236 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
CCNF-203ENST00000564236 LRP1Q07954 4544 aaKnown RBP10.83□□□□□ -0.68
CCNF-203ENST00000564236 F2Z2F3 143 aa10.82□□□□□ -0.68
CCNF-203ENST00000564236 EIF5AL1Q6IS14 154 aaKnown RBP10.82□□□□□ -0.68
CCNF-203ENST00000564236 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 TEX46H3BTG2 121 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 PDE6DO43924 150 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 PRSS1P07477 247 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 SULT1A2P50226 295 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 MEF2BQ02080 365 aaPredicted RBP10.81□□□□□ -0.68
CCNF-203ENST00000564236 C9orf163Q8N9P6 203 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
CCNF-203ENST00000564236 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 XKRY2A2RUG3 117 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 GZMBP10144 247 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 WDR73Q6P4I2 378 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
CCNF-203ENST00000564236 DAZAP1Q96EP5 407 aaKnown RBP10.8□□□□□ -0.68
CCNF-203ENST00000564236 OXTP01178 125 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 GNG4P50150 75 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 SSTP61278 116 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 GAGE6Q13070 117 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 C9orf62Q8N4C0 152 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 CLRN3Q8NCR9 226 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 BIN3Q9NQY0 253 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
CCNF-203ENST00000564236 RAB19A4D1S5 217 aa10.78□□□□□ -0.68
CCNF-203ENST00000564236 P01737 135 aa10.78□□□□□ -0.68
CCNF-203ENST00000564236 TRGC1P0CF51 173 aa10.78□□□□□ -0.68
CCNF-203ENST00000564236 RASL11AQ6T310 242 aa10.78□□□□□ -0.68
CCNF-203ENST00000564236 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
CCNF-203ENST00000564236 TRAV8-4A0A0B4J246 113 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 MGPP08493 103 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 BCL2P10415 239 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 CTRLP40313 264 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
CCNF-203ENST00000564236 REG3AQ06141 175 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 NIT2Q9NQR4 276 aa10.77□□□□□ -0.69
CCNF-203ENST00000564236 IFNA1P01562 189 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 TAGLN2P37802 199 aaKnown RBP10.76□□□□□ -0.69
CCNF-203ENST00000564236 CIRBPQ14011 172 aaKnown RBP10.76□□□□□ -0.69
CCNF-203ENST00000564236 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 LYZL1Q6UWQ5 148 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 TCTE3Q8IZS6 198 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 TMEM243Q9BU79 118 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 DPH3P1Q9H4G8 78 aa10.76□□□□□ -0.69
CCNF-203ENST00000564236 NTF3P20783 257 aa10.75□□□□□ -0.69
CCNF-203ENST00000564236 NKX2-5P52952 324 aaPredicted RBP10.75□□□□□ -0.69
CCNF-203ENST00000564236 MED9Q9NWA0 146 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms