RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 RHOGP84095 191 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 KLRD1Q13241 179 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 FXYD3Q14802 87 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 LY6EQ16553 131 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 MRPL51Q4U2R6 128 aaKnown RBP3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 AMTNQ6UX39 209 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 ZFAND2AQ8N6M9 145 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 LSM10Q969L4 123 aaKnown RBP3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 TNFRSF19Q9NS68 423 aa3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 KLK5Q9Y337 293 aaPredicted RBP3.48□□□□□ -1.85
VPS35P1-201ENST00000563400 CELSR2Q9HCU4 2923 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 TRBV7-1A0A0A6YYK4 115 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 TCRBV4S1A1TA0A5B7 111 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 MEIS3P1A6NDR6 274 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 FAM223BA6NKX1 122 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 J3QR89 54 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 NDUFA3O95167 84 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 KRASP01116 189 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 IGHV3-7P01780 117 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 IL7P13232 177 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 TSPEAR-AS2P59090 65 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 AMMECR1LQ6DCA0 310 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 UNQ5815/PRO19632Q6UWF5 114 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 ZNF329Q86UD4 541 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 NDUFA11Q86Y39 141 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 FAM223AQ8IWN6 122 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 Q8N2B8 174 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 LEAP2Q969E1 77 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 HIST1H2BAQ96A08 127 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 CST9LQ9H4G1 147 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 LINC00588Q9Y4M8 146 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 ITPR3Q14573 2671 aa3.47□□□□□ -1.85
VPS35P1-201ENST00000563400 UTP20O75691 2785 aaKnown RBP3.46□□□□□ -1.85
VPS35P1-201ENST00000563400 CSPG4Q6UVK1 2322 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 CYSRT1A8MQ03 144 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 CEBPZOSA8MTT3 80 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 SNRPGP15A8MWD9 76 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 LEPROTO15243 131 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 NDUFB6O95139 128 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 FGF7P21781 194 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 RPL27AP46776 148 aaKnown RBP3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 RPS10P46783 165 aaKnown RBP3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 RPL39P5Q59GN2 51 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 CRYBG3Q68DQ2 2970 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 HCP5Q6MZN7 132 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 C5orf56Q8N8D9 126 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 TMEM167AQ8TBQ9 72 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 ITPR2Q14571 2701 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 KIAA2026Q5HYC2 2103 aa3.46□□□□□ -1.86
VPS35P1-201ENST00000563400 CRYM-AS1A6NIL9 109 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 K7ERJ3 54 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 TFF1P04155 84 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 IL5P05113 134 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 GPX1P07203 203 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 SLC25A4P12235 298 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 S100A4P26447 101 aaKnown RBP3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 HLA-DMBP28068 263 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 MEF2BQ02080 365 aaPredicted RBP3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 ZNF818PQ6ZRF7 136 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 ZNF767PQ75MW2 155 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 LINC00305Q7Z4B0 112 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 BPIFA4PQ86YQ2 179 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 UBALD1Q8TB05 177 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 C11orf1Q9H5F2 150 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 F8P00451 2351 aa3.45□□□□□ -1.86
VPS35P1-201ENST00000563400 GGCTO75223 188 aaKnown RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 CST7O76096 145 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 SFT2D2O95562 160 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 IGKV1-16P04430 117 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 NPPCP23582 126 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 EIF5AP63241 154 aaKnown RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 TTC9CQ8N5M4 171 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 ZNF431Q8TF32 576 aaPredicted RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 OR4C12Q96R67 309 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 ZNF471Q9BX82 626 aaPredicted RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 MRPL32Q9BYC8 188 aaKnown RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 V9GYH0 126 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 POLQO75417 2590 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 FAM236AA0A1B0GUQ0 79 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 FAM236BA0A1B0GV22 79 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 LECT2O14960 151 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 SAA1P0DJI8 122 aaPredicted RBP3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 PTHLHP12272 177 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 TPPP2P59282 170 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 UBE2BP63146 152 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 PRCDQ00LT1 54 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms