RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	TRBV6-8	A0A0A6YYG3	113 aa		14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200	TAGLN2	P37802	199 aa	Known RBP	14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200	FER1L6-AS1	Q8NA97	138 aa		14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200	DAZAP1	Q96EP5	407 aa	Known RBP	14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200	DNAJC30	Q96LL9	226 aa		14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200	AP1S3	Q96PC3	154 aa		14.42	□□□□□ -0.1
PPP4C-205	ENST00000563200		F5H697	171 aa		14.41	□□□□□ -0.1
PPP4C-205	ENST00000563200	KLK12	Q9UKR0	248 aa		14.41	□□□□□ -0.1
PPP4C-205	ENST00000563200		P01737	135 aa		14.4	□□□□□ -0.1
PPP4C-205	ENST00000563200	TPPP3	Q9BW30	176 aa		14.4	□□□□□ -0.1
PPP4C-205	ENST00000563200	COX11	Q9Y6N1	276 aa		14.4	□□□□□ -0.1
PPP4C-205	ENST00000563200		A0A087WX48	190 aa		14.39	□□□□□ -0.11
PPP4C-205	ENST00000563200	SMIM17	P0DL12	118 aa		14.39	□□□□□ -0.11
PPP4C-205	ENST00000563200	BIN3	Q9NQY0	253 aa		14.39	□□□□□ -0.11
PPP4C-205	ENST00000563200	VPS13B	Q7Z7G8	4022 aa		14.39	□□□□□ -0.11
PPP4C-205	ENST00000563200	CACNG7	P62955	275 aa		14.38	□□□□□ -0.11
PPP4C-205	ENST00000563200	IFITM2	Q01629	132 aa		14.38	□□□□□ -0.11
PPP4C-205	ENST00000563200	ATRAID	Q6UW56	229 aa		14.38	□□□□□ -0.11
PPP4C-205	ENST00000563200	SRRM2	Q9UQ35	2752 aa	Known RBP	14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	XKRY2	A2RUG3	117 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200		F2Z2F3	143 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200		M0QY20	66 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	ELOB	Q15370	118 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	ALKAL2	Q6UX46	152 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	NTM-AS1	Q6ZSK4	140 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	NUDT10	Q8NFP7	164 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	LYPD6B	Q8NI32	183 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	NUDT11	Q96G61	164 aa		14.37	□□□□□ -0.11
PPP4C-205	ENST00000563200	LECT2	O14960	151 aa		14.36	□□□□□ -0.11
PPP4C-205	ENST00000563200	UBE2W	Q96B02	151 aa		14.36	□□□□□ -0.11
PPP4C-205	ENST00000563200	RMI2	Q96E14	147 aa		14.36	□□□□□ -0.11
PPP4C-205	ENST00000563200	TMEM70	Q9BUB7	260 aa		14.36	□□□□□ -0.11
PPP4C-205	ENST00000563200	EPM2A	B3EWF7	344 aa		14.35	□□□□□ -0.11
PPP4C-205	ENST00000563200		K7EN84	100 aa		14.35	□□□□□ -0.11
PPP4C-205	ENST00000563200	LYZL1	Q6UWQ5	148 aa		14.35	□□□□□ -0.11
PPP4C-205	ENST00000563200	OCC1	Q8TAD7	63 aa		14.35	□□□□□ -0.11
PPP4C-205	ENST00000563200	BAALC	Q8WXS3	180 aa		14.35	□□□□□ -0.11
PPP4C-205	ENST00000563200	TMEM262	E9PQX1	116 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	CTRL	P40313	264 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	BLOC1S1	P78537	153 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	MPV17L2	Q567V2	206 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	SUMO4	Q6EEV6	95 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	KCNIP4	Q6PIL6	250 aa		14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	14.34	□□□□□ -0.11
PPP4C-205	ENST00000563200	IGKV2D-24	A0A075B6R9	120 aa		14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	NKX2-5	P52952	324 aa	Predicted RBP	14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	TMEM97	Q5BJF2	176 aa		14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	WDR73	Q6P4I2	378 aa		14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	ENHO	Q6UWT2	76 aa		14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	CNFN	Q9BYD5	112 aa		14.33	□□□□□ -0.11
PPP4C-205	ENST00000563200	TMEM250	H0YL14	139 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	MGP	P08493	103 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	NTF3	P20783	257 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200		Q0VG73	95 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	RNASE7	Q9H1E1	156 aa	Known RBP	14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	FAM30A	Q9NZY2	134 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	CHCHD5	Q9BSY4	110 aa		14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	RPP21	Q9H633	154 aa	Known RBP	14.32	□□□□□ -0.12
PPP4C-205	ENST00000563200	MYCBP2	O75592	4640 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200		H7C1H1	209 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200	TRGC1	P0CF51	173 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200	HAMP	P81172	84 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200	C15orf54	Q8N8G6	183 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200		Q8N976	141 aa		14.31	□□□□□ -0.12
PPP4C-205	ENST00000563200	PKIA	P61925	76 aa		14.3	□□□□□ -0.12
PPP4C-205	ENST00000563200	IQCJ	Q1A5X6	159 aa		14.3	□□□□□ -0.12
PPP4C-205	ENST00000563200		Q5VSD8	79 aa		14.3	□□□□□ -0.12
PPP4C-205	ENST00000563200	DPH3P1	Q9H4G8	78 aa		14.3	□□□□□ -0.12
PPP4C-205	ENST00000563200	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	14.29	□□□□□ -0.12
PPP4C-205	ENST00000563200	RASL11A	Q6T310	242 aa		14.29	□□□□□ -0.12
PPP4C-205	ENST00000563200		Q6ZSA8	131 aa		14.29	□□□□□ -0.12
PPP4C-205	ENST00000563200	TRBV25-1	A0A075B6N4	114 aa		14.28	□□□□□ -0.12
PPP4C-205	ENST00000563200	SMR3B	P02814	79 aa	Predicted RBP	14.28	□□□□□ -0.12
PPP4C-205	ENST00000563200	GTSF1	Q8WW33	167 aa		14.28	□□□□□ -0.12
PPP4C-205	ENST00000563200	PRR34	Q9NV39	138 aa		14.28	□□□□□ -0.12
PPP4C-205	ENST00000563200	ANG	P03950	147 aa	Known RBP	14.27	□□□□□ -0.12
PPP4C-205	ENST00000563200	RBX1	P62877	108 aa		14.27	□□□□□ -0.12
PPP4C-205	ENST00000563200	FRZB	Q92765	325 aa		14.27	□□□□□ -0.12
PPP4C-205	ENST00000563200	C1orf43	Q9BWL3	253 aa		14.27	□□□□□ -0.12
PPP4C-205	ENST00000563200	HERC1	Q15751	4861 aa		14.27	□□□□□ -0.13
PPP4C-205	ENST00000563200	NIT2	Q9NQR4	276 aa		14.26	□□□□□ -0.13
PPP4C-205	ENST00000563200	IGHV1-24	A0A0C4DH33	117 aa		14.25	□□□□□ -0.13
PPP4C-205	ENST00000563200	CRP	P02741	224 aa		14.25	□□□□□ -0.13
PPP4C-205	ENST00000563200	GAGE6	Q13070	117 aa		14.25	□□□□□ -0.13
PPP4C-205	ENST00000563200	TWIST1	Q15672	202 aa		14.25	□□□□□ -0.13
PPP4C-205	ENST00000563200	FAM231D	Q6ZW35	169 aa		14.25	□□□□□ -0.13
PPP4C-205	ENST00000563200	NDUFS6	O75380	124 aa	Known RBP	14.24	□□□□□ -0.13
PPP4C-205	ENST00000563200	MIA	Q16674	131 aa		14.24	□□□□□ -0.13
PPP4C-205	ENST00000563200	SLC7A5P1	Q8MH63	180 aa		14.24	□□□□□ -0.13
PPP4C-205	ENST00000563200	FLG2	Q5D862	2391 aa	Predicted RBP	14.24	□□□□□ -0.13
PPP4C-205	ENST00000563200	PGLYRP4	Q96LB8	373 aa		14.24	□□□□□ -0.13
PPP4C-205	ENST00000563200	LINC01620	Q4KN68	170 aa		14.23	□□□□□ -0.13
PPP4C-205	ENST00000563200	KRTAP26-1	Q6PEX3	210 aa		14.23	□□□□□ -0.13
PPP4C-205	ENST00000563200	LINC00269	Q8N2A0	174 aa		14.23	□□□□□ -0.13
PPP4C-205	ENST00000563200	DMBT1	Q9UGM3	2413 aa	Predicted RBP	14.22	□□□□□ -0.13
PPP4C-205	ENST00000563200	GATD1	Q8NB37	220 aa		14.22	□□□□□ -0.13
PPP4C-205	ENST00000563200	GATC	O43716	136 aa	Known RBP	14.21	□□□□□ -0.13
PPP4C-205	ENST00000563200	INAFM2	P0DMQ5	153 aa		14.21	□□□□□ -0.13
PPP4C-205	ENST00000563200	FOXA3	P55318	350 aa	Predicted RBP	14.21	□□□□□ -0.13
PPP4C-205	ENST00000563200	CEBPG	P53567	150 aa		14.2	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms