RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 RBMY1DP0C7P1 496 aaKnown RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 RBMY1A1P0DJD3 496 aaKnown RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 RBMY1CP0DJD4 496 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 XGP55808 180 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 RBMY1FQ15415 496 aaKnown RBP5.76□□□□□ -1.49
TCF4-216ENST00000562680 LY6G6DO95868 133 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 C1orf159Q96HA4 380 aa5.76□□□□□ -1.49
TCF4-216ENST00000562680 PFN2P35080 140 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 KIR2DL5BQ8NHK3 375 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 A0A0J9YX75 114 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 NPYP01303 97 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 KLK9Q9UKQ9 250 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 PLXNB1O43157 2135 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 K7EQG2 157 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 MRPL51Q4U2R6 128 aaKnown RBP5.75□□□□□ -1.49
TCF4-216ENST00000562680 TMEM61Q8N0U2 210 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 JPT2Q9H910 190 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 ADARB2-AS1A8MUL3 147 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 TRBV12-3P01733 135 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 DAD1P61803 113 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
TCF4-216ENST00000562680 KLF5Q13887 457 aaPredicted RBP5.75□□□□□ -1.49
TCF4-216ENST00000562680 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.75□□□□□ -1.49
TCF4-216ENST00000562680 F6UB75 175 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 PLNP26678 52 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
TCF4-216ENST00000562680 TANC2Q9HCD6 1990 aa5.75□□□□□ -1.49
TCF4-216ENST00000562680 A0A087WX48 190 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 AVPP01185 164 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 HLA-DRB4P13762 266 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
TCF4-216ENST00000562680 C16orf74Q96GX8 76 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 HLA-DRB4X5D2U9 266 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 TRAV12-2A0A075B6T6 113 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 A0A087WWL8 130 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 LOC107984640A0A0U1RRK4 108 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 CXCL5P42830 114 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 LGALS9BQ3B8N2 356 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 LGALS9CQ6DKI2 356 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 RAI1Q7Z5J4 1906 aaPredicted RBP5.74□□□□□ -1.49
TCF4-216ENST00000562680 ZNF815PA8K554 130 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 INAFM1C9JVW0 142 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 I3L3M4 83 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 PRB4P10163 310 aaPredicted RBP5.74□□□□□ -1.49
TCF4-216ENST00000562680 DEFB121Q5J5C9 76 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 HIST2H2BCQ6DN03 193 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 TOMM7Q9P0U1 55 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 ARHGAP32A7KAX9 2087 aa5.74□□□□□ -1.49
TCF4-216ENST00000562680 MYMXA0A1B0GTQ4 84 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 C19orf71A6NCJ1 209 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 PLEKHB2Q96CS7 222 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 CRPP02741 224 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 RHOHQ15669 191 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 LINC01006Q8NI28 216 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 COL27A1Q8IZC6 1860 aaPredicted RBP5.73□□□□□ -1.49
TCF4-216ENST00000562680 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 CRLF1O75462 422 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 DEFB130BP0DP73 79 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 DEFB130AP0DP74 79 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 TM2D2Q9BX73 214 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 HIGD1BQ9P298 99 aa5.73□□□□□ -1.49
TCF4-216ENST00000562680 FASNP49327 2511 aaKnown RBP5.72□□□□□ -1.49
TCF4-216ENST00000562680 DEFB114Q30KQ6 69 aa5.72□□□□□ -1.49
TCF4-216ENST00000562680 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
TCF4-216ENST00000562680 IGHV3-53P01767 116 aa5.72□□□□□ -1.49
TCF4-216ENST00000562680 EDN2P20800 178 aa5.72□□□□□ -1.49
TCF4-216ENST00000562680 MAP6D1Q9H9H5 199 aa5.72□□□□□ -1.49
TCF4-216ENST00000562680 SMKR1H3BMG3 65 aa5.71□□□□□ -1.49
TCF4-216ENST00000562680 INAFM2P0DMQ5 153 aa5.71□□□□□ -1.49
TCF4-216ENST00000562680 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.49
TCF4-216ENST00000562680 IGKV3D-20A0A0C4DH25 116 aa5.71□□□□□ -1.49
TCF4-216ENST00000562680 C2orf66Q6UXQ4 117 aa5.71□□□□□ -1.49
TCF4-216ENST00000562680 TLN2Q9Y4G6 2542 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 GTSF1Q8WW33 167 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 RASL10AQ92737 203 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 C16orf95Q9H693 158 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 IMUPQ9GZP8 106 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 ZMAT4Q9H898 229 aa5.71□□□□□ -1.5
TCF4-216ENST00000562680 E9PLD3 99 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 APRG1Q8IVJ8 170 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 WNK1Q9H4A3 2382 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 COX7CP15954 63 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 PIFOQ8TCI5 191 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 LINC00526Q96FQ7 95 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 GNRH2O43555 120 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 ABCA12Q86UK0 2595 aa5.7□□□□□ -1.5
TCF4-216ENST00000562680 GHRHP01286 108 aa5.69□□□□□ -1.5
TCF4-216ENST00000562680 IGLV2-8P01709 118 aa5.69□□□□□ -1.5
TCF4-216ENST00000562680 SPART-AS1P0CW21 52 aa5.69□□□□□ -1.5
TCF4-216ENST00000562680 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
TCF4-216ENST00000562680 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms