RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 DEFB135Q30KP9 77 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 LINC00467Q9BRT7 94 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 GAGE7O76087 117 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 GAGE12FP0CL80 117 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 GAGE12GP0CL81 117 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 GAGE12IP0CL82 117 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 VAMP8Q9BV40 100 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 C1QTNF4Q9BXJ3 329 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 LINC01546A6NGU7 62 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 UFSP1Q6NVU6 142 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 TP73-AS1Q9UF72 201 aa7.81□□□□□ -1.16
SNRPA1-211ENST00000560433 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 A8MWV9 139 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 POLR2KP53803 58 aaKnown RBP7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 KRTAP10-11P60412 298 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 IL17DQ8TAD2 202 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 SPXQ9BT56 116 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 PKIAP61925 76 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 RPL39P62891 51 aaKnown RBP7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 SPATA45Q537H7 98 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 OR4C5Q8NGB2 326 aa7.8□□□□□ -1.16
SNRPA1-211ENST00000560433 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 PRSS1P07477 247 aa7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 DKK2Q9UBU2 259 aa7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 IGHV4-30-4P0DP06 118 aa7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 PHLDA1Q8WV24 401 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 C16orf74Q96GX8 76 aa7.79□□□□□ -1.16
SNRPA1-211ENST00000560433 TRGV2A0A075B6R0 118 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 RS1O15537 224 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 DEFB130BP0DP73 79 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 DEFB130AP0DP74 79 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 SHISA2Q6UWI4 295 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 C2orf66Q6UXQ4 117 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 ZFP2Q6ZN57 461 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 C14orf144Q96I85 54 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 G3V4G9 280 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 VCYO14598 125 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 PPP1R17O96001 155 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 KIR2DL4Q99706 377 aa7.78□□□□□ -1.16
SNRPA1-211ENST00000560433 PRB2P02812 416 aaPredicted RBP7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 ORMDL2Q53FV1 153 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 X6R8D5 127 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 DDTP30046 118 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 SCGB3A1Q96QR1 104 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
SNRPA1-211ENST00000560433 NBEAL1Q6ZS30 2694 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 TRBV6-5A0A0K0K1A5 114 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 TRBV27A0A0K0K1C4 114 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 C20orf202A1L168 122 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 STPG4Q8N801 248 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 TRAV9-2A0A087WT02 112 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 KIR2DL5BA0A0G2JN68 375 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 KIR2DL5BA0A0G2JPC4 375 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 LOC100131303A0A0U1RQF7 123 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 TSHBP01222 138 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 KIR2DL5AQ8N109 375 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 TOMM6Q96B49 74 aa7.76□□□□□ -1.17
SNRPA1-211ENST00000560433 H7C1H1 209 aa7.75□□□□□ -1.17
SNRPA1-211ENST00000560433 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
SNRPA1-211ENST00000560433 OR11H2Q8NH07 326 aa7.75□□□□□ -1.17
SNRPA1-211ENST00000560433 ZNRF2Q8NHG8 242 aa7.75□□□□□ -1.17
SNRPA1-211ENST00000560433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 I3L3M4 83 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 CEMP1Q6PRD7 247 aaPredicted RBP7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 PTH2Q96A98 100 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 RHODO00212 210 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 WIPF1O43516 503 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 ODF1Q14990 250 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 PIK3CD-AS1Q5SR53 167 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 Q6ZN92 141 aa7.74□□□□□ -1.17
SNRPA1-211ENST00000560433 TRAV4A0A0B4J268 109 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 GAGE1Q13065 139 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 GAGE4Q13068 117 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 GAGE5Q13069 117 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 LGALS9BQ3B8N2 356 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 MDFIQ99750 246 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 RETNQ9HD89 108 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 MGAM2Q2M2H8 2515 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 APOC4P55056 127 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 LGALS9CQ6DKI2 356 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 OVOL2Q9BRP0 275 aa7.73□□□□□ -1.17
SNRPA1-211ENST00000560433 CYSLTR1Q9Y271 337 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms