RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 UBE2D4Q9Y2X8 147 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 CABIN1Q9Y6J0 2220 aa3.09□□□□□ -1.91
HMGB3P26-201ENST00000560051 PLXNA3P51805 1871 aa3.09□□□□□ -1.92
HMGB3P26-201ENST00000560051 LRP4O75096 1905 aa3.09□□□□□ -1.92
HMGB3P26-201ENST00000560051 DLG5Q8TDM6 1919 aa3.09□□□□□ -1.92
HMGB3P26-201ENST00000560051 MPDZO75970 2070 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 PAPPAQ13219 1627 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 WDR90Q96KV7 1748 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGHV3-15A0A0B4J1V0 119 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 TRAV22A0A0B4J277 110 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 TEX49A0A1B0GTD5 131 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 F8WEM9 126 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGLV1-51P01701 117 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 IFI6P09912 130 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 MGST1P10620 155 aaKnown RBP3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 ROMO1P60602 79 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 LYZL2Q7Z4W2 148 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 FAM19A2Q8N3H0 131 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 LINC00574Q9H8X3 128 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 TIMM9Q9Y5J7 89 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 ANKRD36A6QL64 1941 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 LCTP09848 1927 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 SHPRHQ149N8 1683 aa3.08□□□□□ -1.92
HMGB3P26-201ENST00000560051 A0A087WSZ3 146 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 TRBV30A0A0K0K1B3 111 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 C11orf94C9JXX5 98 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 SPANXN5Q5MJ07 72 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 Q8NDZ9 215 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 ZNF563Q8TA94 476 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 NRXN3Q9Y4C0 1643 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 PLXNB3Q9ULL4 1909 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 NCOA6Q14686 2063 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 MYO7BQ6PIF6 2116 aa3.07□□□□□ -1.92
HMGB3P26-201ENST00000560051 PINLYPA6NC86 204 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 A6NED7 52 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 FAM223BA6NKX1 122 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 E7EUB6 86 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 LECT2O14960 151 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 HCRTO43612 131 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGLV3-25P01717 112 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 BAALC-AS2P0C853 105 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 SAA2P0DJI9 122 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 CGB3P0DN86 165 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 CGB7P0DN87 165 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 HMGA1P17096 107 aaKnown RBP3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 CMC4P56277 68 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 MDC1Q14676 2089 aaKnown RBP3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 LYZL1Q6UWQ5 148 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 Q6ZTC4 211 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 Q8IYB0 196 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 ZNF407Q9C0G0 2248 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 KIAA1549Q9HCM3 1950 aa3.06□□□□□ -1.92
HMGB3P26-201ENST00000560051 MED13Q9UHV7 2174 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 LTBP2Q14767 1821 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 DDX60LQ5H9U9 1706 aaKnown RBP3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGLV10-54A0A075B6I4 117 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGLV3-16A0A075B6K0 115 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 TMSB15BA0A087X1C1 80 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGKV2D-26A0A0A0MRZ7 120 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 TRBV6-8A0A0A6YYG3 113 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGKV6D-41A0A0C4DH26 115 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 A6NDX4 124 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 LINC01549A6NIU2 74 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 C5orf67F2Z3F1 127 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 CRPP02741 224 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 CAV3P56539 151 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 LYZP61626 148 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 ZCCHC23Q6ZST2 131 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 Q8N9W7 124 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 TMEM14BQ9NUH8 114 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 C22orf24Q9Y442 160 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 HEATR5BQ9P2D3 2071 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 PCNX3Q9H6A9 2034 aa3.05□□□□□ -1.92
HMGB3P26-201ENST00000560051 NHSL1Q5SYE7 1610 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 SMIM27A0A1W2PRY6 76 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 A8MWP4 228 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 H3BPC8 53 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 CHKB-CPT1BH3BT56 60 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 H7C2G1 150 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 PPP1R17O96001 155 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 TRGV3P03979 118 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 LINC01547P58512 204 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 RPL36AP83881 106 aaKnown RBP3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 MUC7Q8TAX7 377 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 BPESC1Q9GZL8 116 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 FAM215AQ9Y5M1 114 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 COL4A6Q14031 1691 aa3.04□□□□□ -1.92
HMGB3P26-201ENST00000560051 LAMA4Q16363 1823 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 KIAA1549LQ6ZVL6 1849 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 PAPPA2Q9BXP8 1791 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 LY75O60449 1722 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 CTXND1A0A1B0GTU2 59 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGKV1D-33P01593 117 aa3.03□□□□□ -1.92
HMGB3P26-201ENST00000560051 IGKV1-33P01594 117 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 743.2 ms