RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 Q8N814 137 aa11.72□□□□□ -0.53
SMAD3-210ENST00000559092 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 GZMBP10144 247 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 KRTAP10-1P60331 282 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 RMI2Q96E14 147 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 TPPP3Q9BW30 176 aa11.71□□□□□ -0.53
SMAD3-210ENST00000559092 IGLV5-52A0A0A0MRZ9 124 aa11.7□□□□□ -0.54
SMAD3-210ENST00000559092 RBFOX3A6NFN3 312 aa11.7□□□□□ -0.54
SMAD3-210ENST00000559092 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
SMAD3-210ENST00000559092 PKIAP61925 76 aa11.69□□□□□ -0.54
SMAD3-210ENST00000559092 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
SMAD3-210ENST00000559092 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 H7C1H1 209 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 XGP55808 180 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 ALKAL2Q6UX46 152 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
SMAD3-210ENST00000559092 TMEM262E9PQX1 116 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 M0QY20 66 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 Q0VG73 95 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 LYZL1Q6UWQ5 148 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
SMAD3-210ENST00000559092 ATRAIDQ6UW56 229 aa11.66□□□□□ -0.54
SMAD3-210ENST00000559092 CTRLP40313 264 aa11.65□□□□□ -0.54
SMAD3-210ENST00000559092 UBE2WQ96B02 151 aa11.65□□□□□ -0.54
SMAD3-210ENST00000559092 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
SMAD3-210ENST00000559092 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
SMAD3-210ENST00000559092 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
SMAD3-210ENST00000559092 IGKV2D-24A0A075B6R9 120 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 K7EN84 100 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
SMAD3-210ENST00000559092 MGPP08493 103 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 NTF3P20783 257 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 Q8N976 141 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
SMAD3-210ENST00000559092 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
SMAD3-210ENST00000559092 WFDC2Q14508 124 aa11.63□□□□□ -0.55
SMAD3-210ENST00000559092 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
SMAD3-210ENST00000559092 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
SMAD3-210ENST00000559092 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
SMAD3-210ENST00000559092 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
SMAD3-210ENST00000559092 EPM2AB3EWF7 344 aa11.62□□□□□ -0.55
SMAD3-210ENST00000559092 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
SMAD3-210ENST00000559092 RASL11AQ6T310 242 aa11.62□□□□□ -0.55
SMAD3-210ENST00000559092 BAALCQ8WXS3 180 aa11.62□□□□□ -0.55
SMAD3-210ENST00000559092 TWIST1Q15672 202 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 FAM231DQ6ZW35 169 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 FRZBQ92765 325 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 NIT2Q9NQR4 276 aa11.61□□□□□ -0.55
SMAD3-210ENST00000559092 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
SMAD3-210ENST00000559092 LECT2O14960 151 aa11.6□□□□□ -0.55
SMAD3-210ENST00000559092 CRPP02741 224 aa11.6□□□□□ -0.55
SMAD3-210ENST00000559092 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
SMAD3-210ENST00000559092 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
SMAD3-210ENST00000559092 NKX2-5P52952 324 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-210ENST00000559092 MIAQ16674 131 aa11.59□□□□□ -0.55
SMAD3-210ENST00000559092 EIF5A2Q9GZV4 153 aaKnown RBP11.59□□□□□ -0.55
SMAD3-210ENST00000559092 A8MWL6 223 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
SMAD3-210ENST00000559092 RBX1P62877 108 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 CT83Q5H943 113 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 SMIM15Q7Z3B0 74 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 GTSF1Q8WW33 167 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 PGLYRP4Q96LB8 373 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 PRR34Q9NV39 138 aa11.58□□□□□ -0.56
SMAD3-210ENST00000559092 A0A1B0GVG6 124 aa11.57□□□□□ -0.56
SMAD3-210ENST00000559092 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-210ENST00000559092 GAGE6Q13070 117 aa11.57□□□□□ -0.56
SMAD3-210ENST00000559092 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
SMAD3-210ENST00000559092 CEBPGP53567 150 aa11.56□□□□□ -0.56
SMAD3-210ENST00000559092 C14orf177Q52M58 125 aa11.56□□□□□ -0.56
SMAD3-210ENST00000559092 SMIM7Q9BQ49 75 aa11.56□□□□□ -0.56
SMAD3-210ENST00000559092 FAT1Q14517 4588 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-210ENST00000559092 A0A1B0GUV1 79 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 FAM30AQ9NZY2 134 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
SMAD3-210ENST00000559092 DNAH8Q96JB1 4490 aa11.54□□□□□ -0.56
SMAD3-210ENST00000559092 Q6ZSA8 131 aa11.54□□□□□ -0.56
SMAD3-210ENST00000559092 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
SMAD3-210ENST00000559092 LINC00269Q8N2A0 174 aa11.54□□□□□ -0.56
SMAD3-210ENST00000559092 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
SMAD3-210ENST00000559092 ZNF727A8MUV8 499 aa11.53□□□□□ -0.56
SMAD3-210ENST00000559092 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
SMAD3-210ENST00000559092 SRP19P09132 144 aaKnown RBP11.53□□□□□ -0.56
SMAD3-210ENST00000559092 COTL1Q14019 142 aa11.53□□□□□ -0.56
SMAD3-210ENST00000559092 Q5VSD8 79 aa11.53□□□□□ -0.56
SMAD3-210ENST00000559092 GFRA4Q9GZZ7 299 aa11.53□□□□□ -0.56
SMAD3-210ENST00000559092 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms