RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 P01737 135 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 Q8N814 137 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 TM2D2Q9BX73 214 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 KIF25-AS1Q9Y6Z4 181 aa8.31□□□□□ -1.08
SMAD3-208ENST00000558827 TRAV8-3A0A0A6YYJ7 113 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 PDE6DO43924 150 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 CEBPGP53567 150 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 LYZL1Q6UWQ5 148 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
SMAD3-208ENST00000558827 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
SMAD3-208ENST00000558827 LAGE3Q14657 143 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 C15orf54Q8N8G6 183 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 OCC1Q8TAD7 63 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 CHCHD5Q9BSY4 110 aa8.29□□□□□ -1.08
SMAD3-208ENST00000558827 RNASE7Q9H1E1 156 aaKnown RBP8.29□□□□□ -1.08
SMAD3-208ENST00000558827 TRBV6-8A0A0A6YYG3 113 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 K7EN84 100 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 GAGE6Q13070 117 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 TOR2AQ5JU69 321 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 SUMO4Q6EEV6 95 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 NTM-AS1Q6ZSK4 140 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 Q8N976 141 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
SMAD3-208ENST00000558827 EPM2AB3EWF7 344 aa8.27□□□□□ -1.09
SMAD3-208ENST00000558827 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
SMAD3-208ENST00000558827 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
SMAD3-208ENST00000558827 M0QY20 66 aa8.26□□□□□ -1.09
SMAD3-208ENST00000558827 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
SMAD3-208ENST00000558827 NTF3P20783 257 aa8.26□□□□□ -1.09
SMAD3-208ENST00000558827 CACNG7P62955 275 aa8.26□□□□□ -1.09
SMAD3-208ENST00000558827 BLOC1S1P78537 153 aa8.26□□□□□ -1.09
SMAD3-208ENST00000558827 ATRAIDQ6UW56 229 aa8.26□□□□□ -1.09
SMAD3-208ENST00000558827 XKRY2A2RUG3 117 aa8.25□□□□□ -1.09
SMAD3-208ENST00000558827 FOXA3P55318 350 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-208ENST00000558827 TWIST1Q15672 202 aa8.25□□□□□ -1.09
SMAD3-208ENST00000558827 ENHOQ6UWT2 76 aa8.25□□□□□ -1.09
SMAD3-208ENST00000558827 NTN5Q8WTR8 489 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-208ENST00000558827 RMI2Q96E14 147 aa8.25□□□□□ -1.09
SMAD3-208ENST00000558827 RPP21Q9H633 154 aaKnown RBP8.25□□□□□ -1.09
SMAD3-208ENST00000558827 ELOBQ15370 118 aa8.24□□□□□ -1.09
SMAD3-208ENST00000558827 Q5VSD8 79 aa8.24□□□□□ -1.09
SMAD3-208ENST00000558827 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-208ENST00000558827 SMIM12Q96EX1 92 aa8.24□□□□□ -1.09
SMAD3-208ENST00000558827 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
SMAD3-208ENST00000558827 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 F2Z2F3 143 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
SMAD3-208ENST00000558827 CRPP02741 224 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 TAGLN2P37802 199 aaKnown RBP8.23□□□□□ -1.09
SMAD3-208ENST00000558827 RBX1P62877 108 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
SMAD3-208ENST00000558827 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
SMAD3-208ENST00000558827 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 HLA-DQA1P01909 254 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 TRGC1P0CF51 173 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 LINC00269Q8N2A0 174 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 FRZBQ92765 325 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 C1orf43Q9BWL3 253 aa8.22□□□□□ -1.09
SMAD3-208ENST00000558827 FLG2Q5D862 2391 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-208ENST00000558827 IGHV1-24A0A0C4DH33 117 aa8.21□□□□□ -1.1
SMAD3-208ENST00000558827 H7C1H1 209 aa8.21□□□□□ -1.1
SMAD3-208ENST00000558827 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
SMAD3-208ENST00000558827 CTRLP40313 264 aa8.21□□□□□ -1.1
SMAD3-208ENST00000558827 COX11Q9Y6N1 276 aa8.21□□□□□ -1.1
SMAD3-208ENST00000558827 IGLV10-54A0A075B6I4 117 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 Q0VG73 95 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 LYPD6BQ8NI32 183 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 RPL39LQ96EH5 51 aaKnown RBP8.2□□□□□ -1.1
SMAD3-208ENST00000558827 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 NIT2Q9NQR4 276 aa8.2□□□□□ -1.1
SMAD3-208ENST00000558827 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 IQCJQ1A5X6 159 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 TMEM97Q5BJF2 176 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 SMIM7Q9BQ49 75 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
SMAD3-208ENST00000558827 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
SMAD3-208ENST00000558827 IGLV4-60A0A075B6I1 120 aa8.18□□□□□ -1.1
SMAD3-208ENST00000558827 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
SMAD3-208ENST00000558827 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
SMAD3-208ENST00000558827 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
SMAD3-208ENST00000558827 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
SMAD3-208ENST00000558827 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms