RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 F5H697 171 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 EREGO14944 169 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 MGPP08493 103 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 CEBPGP53567 150 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 SUMO4Q6EEV6 95 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 NTM-AS1Q6ZSK4 140 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 MAPKAPK5-AS1Q8N8E1 139 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 GTSF1Q8WW33 167 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 AP1S3Q96PC3 154 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 PGPEP1Q9NXJ5 209 aa5.39□□□□□ -1.55
VTI1B-206ENST00000556461 TRBV6-8A0A0A6YYG3 113 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 TMEM250H0YL14 139 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 M0QY20 66 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 LECT2O14960 151 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 PSCAO43653 123 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 SMIM17P0DL12 118 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 CTRLP40313 264 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 FOXA3P55318 350 aaPredicted RBP5.38□□□□□ -1.55
VTI1B-206ENST00000556461 CACNG7P62955 275 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 LAGE3Q14657 143 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 RPP21Q9H633 154 aaKnown RBP5.38□□□□□ -1.55
VTI1B-206ENST00000556461 KLK12Q9UKR0 248 aa5.38□□□□□ -1.55
VTI1B-206ENST00000556461 XKRY2A2RUG3 117 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 C9JQL5 133 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 F2Z2F3 143 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 SRP19P09132 144 aaKnown RBP5.37□□□□□ -1.55
VTI1B-206ENST00000556461 NTF3P20783 257 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 XGP55808 180 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 MPV17L2Q567V2 206 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 Q8N814 137 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 FAM210AQ96ND0 272 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 BIN3Q9NQY0 253 aa5.37□□□□□ -1.55
VTI1B-206ENST00000556461 A0A087WX48 190 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 TRAV8-3A0A0A6YYJ7 113 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 TMEM262E9PQX1 116 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 GATCO43716 136 aaKnown RBP5.36□□□□□ -1.55
VTI1B-206ENST00000556461 HAMPP81172 84 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 TWIST1Q15672 202 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 WDR73Q6P4I2 378 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 Q8N976 141 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 BAALCQ8WXS3 180 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 TM2D2Q9BX73 214 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 CNFNQ9BYD5 112 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 EIF5A2Q9GZV4 153 aaKnown RBP5.36□□□□□ -1.55
VTI1B-206ENST00000556461 URGCP-MRPS24S4R325 110 aa5.36□□□□□ -1.55
VTI1B-206ENST00000556461 IGLV5-52A0A0A0MRZ9 124 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 TRAV26-2A0A0B4J265 109 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 TRGC1P0CF51 173 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 GCSHP23434 173 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
VTI1B-206ENST00000556461 GAGE6Q13070 117 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 RASL11AQ6T310 242 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 ATRAIDQ6UW56 229 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 ENHOQ6UWT2 76 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 FAM231DQ6ZW35 169 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 LINC01551Q86U37 167 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 C15orf54Q8N8G6 183 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 GATD1Q8NB37 220 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 SMIM7Q9BQ49 75 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 CHCHD5Q9BSY4 110 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 CHCHD7Q9BUK0 85 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 DPH3P1Q9H4G8 78 aa5.35□□□□□ -1.55
VTI1B-206ENST00000556461 IGKV2D-24A0A075B6R9 120 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 ZNF727A8MUV8 499 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 NDUFS6O75380 124 aaKnown RBP5.34□□□□□ -1.55
VTI1B-206ENST00000556461 GAS8-AS1O95177 125 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 RBX1P62877 108 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 Q8N1X5 172 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 FAM30AQ9NZY2 134 aa5.34□□□□□ -1.55
VTI1B-206ENST00000556461 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
VTI1B-206ENST00000556461 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.33□□□□□ -1.56
VTI1B-206ENST00000556461 H7C1H1 209 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 ANGP03950 147 aaKnown RBP5.33□□□□□ -1.56
VTI1B-206ENST00000556461 IQCJQ1A5X6 159 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 LINC01620Q4KN68 170 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 KCNIP4Q6PIL6 250 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 TEX261Q6UWH6 196 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 NTN5Q8WTR8 489 aaPredicted RBP5.33□□□□□ -1.56
VTI1B-206ENST00000556461 RPL39LQ96EH5 51 aaKnown RBP5.33□□□□□ -1.56
VTI1B-206ENST00000556461 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
VTI1B-206ENST00000556461 TRBV25-1A0A075B6N4 114 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 IGHV1-24A0A0C4DH33 117 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 A8MWL6 223 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 RPL23P62829 140 aaKnown RBP5.32□□□□□ -1.56
VTI1B-206ENST00000556461 ELOBQ15370 118 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 TMEM97Q5BJF2 176 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 CT83Q5H943 113 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 C20orf203Q8NBC4 194 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 TSKUQ8WUA8 353 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 RMI2Q96E14 147 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 GFRA4Q9GZZ7 299 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 OSTCQ9NRP0 149 aa5.32□□□□□ -1.56
VTI1B-206ENST00000556461 V9GYV3 84 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms