RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NUDT11Q96G61 164 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
SLIRP-205ENST00000556310 RPP21Q9H633 154 aaKnown RBP7.79□□□□□ -1.16
SLIRP-205ENST00000556310 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
SLIRP-205ENST00000556310 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 CEBPGP53567 150 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 UBE2D3P61077 147 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 SSTP61278 116 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 UBE2D2P62837 147 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 RNASE7Q9H1E1 156 aaKnown RBP7.78□□□□□ -1.16
SLIRP-205ENST00000556310 TNFRSF18Q9Y5U5 241 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 KIF25-AS1Q9Y6Z4 181 aa7.78□□□□□ -1.16
SLIRP-205ENST00000556310 IBA57-AS1B1ANH7 110 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 F5H697 171 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 IGHV3-30P01768 117 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 IGHV3-33P01772 117 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 IGHV3-30-3P0DP02 117 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 IGHV3-30-5P0DP03 117 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 LAGE3Q14657 143 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 TEX261Q6UWH6 196 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 LYZL1Q6UWQ5 148 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
SLIRP-205ENST00000556310 C16orf90A8MZG2 172 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
SLIRP-205ENST00000556310 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 SPATA12Q7Z6I5 190 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 RYR1P21817 5038 aa7.76□□□□□ -1.17
SLIRP-205ENST00000556310 MGPP08493 103 aa7.75□□□□□ -1.17
SLIRP-205ENST00000556310 CT83Q5H943 113 aa7.75□□□□□ -1.17
SLIRP-205ENST00000556310 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 H7C1H1 209 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 GATCO43716 136 aaKnown RBP7.74□□□□□ -1.17
SLIRP-205ENST00000556310 NTF3P20783 257 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 NIT1Q86X76 327 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-205ENST00000556310 CHCHD7Q9BUK0 85 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 DPH3P1Q9H4G8 78 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 Q9HAA7 133 aa7.74□□□□□ -1.17
SLIRP-205ENST00000556310 A0A087WTM6 91 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 TRBV6-8A0A0A6YYG3 113 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 A8MWL6 223 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 M0QY20 66 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
SLIRP-205ENST00000556310 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
SLIRP-205ENST00000556310 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
SLIRP-205ENST00000556310 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
SLIRP-205ENST00000556310 PSCAO43653 123 aa7.72□□□□□ -1.17
SLIRP-205ENST00000556310 TWIST1Q15672 202 aa7.72□□□□□ -1.17
SLIRP-205ENST00000556310 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
SLIRP-205ENST00000556310 TMEM97Q5BJF2 176 aa7.72□□□□□ -1.17
SLIRP-205ENST00000556310 HSPG2P98160 4391 aa7.72□□□□□ -1.17
SLIRP-205ENST00000556310 A0A087WX48 190 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 TRAV8-3A0A0A6YYJ7 113 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 KCNIP4Q6PIL6 250 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 TM2D2Q9BX73 214 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 OSTCQ9NRP0 149 aa7.71□□□□□ -1.18
SLIRP-205ENST00000556310 C9JQL5 133 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-205ENST00000556310 PKIAP61925 76 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 PEA15Q15121 130 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 ELOBQ15370 118 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 SMIM15Q7Z3B0 74 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 TSKUQ8WUA8 353 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 GFRA4Q9GZZ7 299 aa7.7□□□□□ -1.18
SLIRP-205ENST00000556310 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 CDK2AP2O75956 126 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 PLA2G1BP04054 148 aaKnown RBP7.69□□□□□ -1.18
SLIRP-205ENST00000556310 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 NTM-AS1Q6ZSK4 140 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 C15orf54Q8N8G6 183 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 FRZBQ92765 325 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 ISOC2Q96AB3 205 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 CHCHD5Q9BSY4 110 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 KLK12Q9UKR0 248 aa7.69□□□□□ -1.18
SLIRP-205ENST00000556310 TRBV25-1A0A075B6N4 114 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 LINC00310P59036 64 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
SLIRP-205ENST00000556310 ADIRFQ15847 76 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 IQCJQ1A5X6 159 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 RMI2Q96E14 147 aa7.68□□□□□ -1.18
SLIRP-205ENST00000556310 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms