RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZFAND6Q6FIF0 208 aa8.69□□□□□ -1.02
SHMT2-221ENST00000555773 TNFRSF18Q9Y5U5 241 aa8.69□□□□□ -1.02
SHMT2-221ENST00000555773 A0A096LPF7 62 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 COLCA2A8K830 154 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 NUDT3O95989 172 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 P0DMU3 169 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 FAM231AP0DMU4 169 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 FAM231CP0DMU5 169 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 SRIP30626 198 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
SHMT2-221ENST00000555773 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 Q9UF83 564 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 TRAPPC1Q9Y5R8 145 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 DNAH7Q8WXX0 4024 aa8.68□□□□□ -1.02
SHMT2-221ENST00000555773 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 D6R8Y8 96 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 NACAE9PAV3 2078 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 PHOX2AO14813 284 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 GAGE1Q13065 139 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 GAGE4Q13068 117 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 GAGE5Q13069 117 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 CASC10Q5T4H9 136 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
SHMT2-221ENST00000555773 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
SHMT2-221ENST00000555773 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
SHMT2-221ENST00000555773 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 UBE2D3P61077 147 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 UBE2D2P62837 147 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
SHMT2-221ENST00000555773 PRELID3AQ96N28 172 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 C20orf78Q9BR46 151 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
SHMT2-221ENST00000555773 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
SHMT2-221ENST00000555773 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
SHMT2-221ENST00000555773 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
SHMT2-221ENST00000555773 RAB5AP20339 215 aa8.65□□□□□ -1.02
SHMT2-221ENST00000555773 TIRAPP58753 221 aa8.65□□□□□ -1.02
SHMT2-221ENST00000555773 NRACQ8N912 160 aa8.65□□□□□ -1.02
SHMT2-221ENST00000555773 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
SHMT2-221ENST00000555773 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 VCYO14598 125 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 TNFRSF6BO95407 300 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 NCR2O95944 276 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
SHMT2-221ENST00000555773 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
SHMT2-221ENST00000555773 RPL32P62910 135 aaKnown RBP8.64□□□□□ -1.03
SHMT2-221ENST00000555773 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
SHMT2-221ENST00000555773 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
SHMT2-221ENST00000555773 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
SHMT2-221ENST00000555773 CCL18P55774 89 aa8.63□□□□□ -1.03
SHMT2-221ENST00000555773 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
SHMT2-221ENST00000555773 LYPD5Q6UWN5 251 aa8.63□□□□□ -1.03
SHMT2-221ENST00000555773 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-221ENST00000555773 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 NPYP01303 97 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 PMCHP20382 165 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 ESRGQ1W209 222 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 STARD9Q9P2P6 4700 aa8.62□□□□□ -1.03
SHMT2-221ENST00000555773 I3L3M4 83 aa8.61□□□□□ -1.03
SHMT2-221ENST00000555773 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
SHMT2-221ENST00000555773 TCAPO15273 167 aa8.6□□□□□ -1.03
SHMT2-221ENST00000555773 TRGC2P03986 189 aa8.6□□□□□ -1.03
SHMT2-221ENST00000555773 COTL1Q14019 142 aa8.6□□□□□ -1.03
SHMT2-221ENST00000555773 LELP1Q5T871 98 aa8.6□□□□□ -1.03
SHMT2-221ENST00000555773 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
SHMT2-221ENST00000555773 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
SHMT2-221ENST00000555773 IGHV3-38A0A0C4DH36 116 aa8.59□□□□□ -1.03
SHMT2-221ENST00000555773 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.03
SHMT2-221ENST00000555773 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
SHMT2-221ENST00000555773 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.03
SHMT2-221ENST00000555773 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
SHMT2-221ENST00000555773 K7EMI3 77 aa8.58□□□□□ -1.04
SHMT2-221ENST00000555773 LGALS9CQ6DKI2 356 aa8.58□□□□□ -1.04
SHMT2-221ENST00000555773 Q8N8P6 123 aa8.58□□□□□ -1.04
SHMT2-221ENST00000555773 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
SHMT2-221ENST00000555773 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
SHMT2-221ENST00000555773 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 FCER1GP30273 86 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 IQCJQ1A5X6 159 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
SHMT2-221ENST00000555773 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
SHMT2-221ENST00000555773 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms