RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 H3BNG1 76 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 M0QY20 66 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 TNFRSF6BO95407 300 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 CRYBA4P53673 196 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 FHL2Q14192 279 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 C15orf53Q8NAA6 179 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 KIR2DL4Q99706 377 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 C20orf78Q9BR46 151 aa7.91□□□□□ -1.14
SHMT2-220ENST00000555634 A0A0J9YY99 117 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 SMKR1H3BMG3 65 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 GYPEP15421 78 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 HOXA5P20719 270 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 FCER1GP30273 86 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 SUMO2P61956 95 aaKnown RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
SHMT2-220ENST00000555634 DAZ4Q86SG3 579 aaKnown RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 PHLDA1Q8WV24 401 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 NXT2Q9NPJ8 142 aaKnown RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 DAZ3Q9NR90 486 aaKnown RBP7.9□□□□□ -1.14
SHMT2-220ENST00000555634 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 TRBV6-5A0A0K0K1A5 114 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 GAGE12JA6NER3 117 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 LINC00315P59091 139 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 GAGE1Q13065 139 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 GAGE4Q13068 117 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 GAGE5Q13069 117 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 FA2HQ7L5A8 372 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 ZNRF2Q8NHG8 242 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
SHMT2-220ENST00000555634 RPL39LQ96EH5 51 aaKnown RBP7.89□□□□□ -1.15
SHMT2-220ENST00000555634 ALKBH7Q9BT30 221 aaPredicted RBP7.89□□□□□ -1.15
SHMT2-220ENST00000555634 SDHAF1A6NFY7 115 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 I3L3M4 83 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 K7EMI3 77 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 VCYO14598 125 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 NUDT3O95989 172 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 NPYP01303 97 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 S100A6P06703 90 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 G0S2P27469 103 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 COTL1Q14019 142 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 NEXN-AS1Q8NBZ9 246 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 SMIM2Q9BVW6 85 aa7.88□□□□□ -1.15
SHMT2-220ENST00000555634 TCTAP57738 103 aa7.87□□□□□ -1.15
SHMT2-220ENST00000555634 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
SHMT2-220ENST00000555634 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
SHMT2-220ENST00000555634 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
SHMT2-220ENST00000555634 NRACQ8N912 160 aa7.87□□□□□ -1.15
SHMT2-220ENST00000555634 STAB2Q8WWQ8 2551 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 LOC389332A0A1B0GUA5 103 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 IGLL5B9A064 214 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 P0DMU3 169 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 FAM231AP0DMU4 169 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 FAM231CP0DMU5 169 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 RNASEKQ6P5S7 137 aaKnown RBP7.86□□□□□ -1.15
SHMT2-220ENST00000555634 Q6ZSN1 163 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 ATP6V0E2Q8NHE4 81 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 TMEM70Q9BUB7 260 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
SHMT2-220ENST00000555634 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 TRBV27A0A0K0K1C4 114 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 UBE2L6O14933 153 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 UBE2D3P61077 147 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 PKIAP61925 76 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 UBE2D2P62837 147 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 CEMP1Q6PRD7 247 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-220ENST00000555634 Q8N8P6 123 aa7.85□□□□□ -1.15
SHMT2-220ENST00000555634 LINC01549A6NIU2 74 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BKO60814 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HSBP1O75506 76 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BJP06899 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BOP23527 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 AMTP48728 403 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 Q0VG73 95 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
SHMT2-220ENST00000555634 MUC7Q8TAX7 377 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
SHMT2-220ENST00000555634 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
SHMT2-220ENST00000555634 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
SHMT2-220ENST00000555634 IGHV1-24A0A0C4DH33 117 aa7.83□□□□□ -1.16
SHMT2-220ENST00000555634 LOC100131303A0A0U1RQF7 123 aa7.83□□□□□ -1.16
SHMT2-220ENST00000555634 PRSS47A8MTI9 375 aa7.83□□□□□ -1.16
SHMT2-220ENST00000555634 IFI27P40305 119 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-220ENST00000555634 LAGE3Q14657 143 aa7.83□□□□□ -1.16
SHMT2-220ENST00000555634 GTSF1LQ9H1H1 148 aa7.83□□□□□ -1.16
SHMT2-220ENST00000555634 RYR3Q15413 4870 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms