RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
SYNE2-216ENST00000555002 M0R2N4 97 aa5.38□□□□□ -1.55
SYNE2-216ENST00000555002 NPSP0C0P6 89 aa5.38□□□□□ -1.55
SYNE2-216ENST00000555002 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
SYNE2-216ENST00000555002 LHFPL1Q86WI0 220 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 WT1-ASQ06250 92 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-216ENST00000555002 USP9XQ93008 2570 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-216ENST00000555002 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-216ENST00000555002 C7orf33Q8WU49 177 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 FOXI1Q12951 378 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 PYY3Q5JQD4 70 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 C11orf52Q96A22 123 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 KIR2DL5BA0A0G2JN68 375 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 KIR2DL5BA0A0G2JPC4 375 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 KIR2DL5AQ8N109 375 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 FGF23Q9GZV9 251 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-216ENST00000555002 LGALS9BQ3B8N2 356 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 LGALS9CQ6DKI2 356 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
SYNE2-216ENST00000555002 H3BUA1 57 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 J3QRE1 110 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 MRPL55Q7Z7F7 128 aaKnown RBP5.36□□□□□ -1.55
SYNE2-216ENST00000555002 TRBV7-3A0A075B6L6 115 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 C9JQL5 133 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 H0YGX0 51 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 WI2-2373I1.2A0A1W2PRP0 233 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 BPY2O14599 106 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 NAV2Q8IVL1 2488 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 IGLL1P15814 213 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 V9GYV3 84 aa5.36□□□□□ -1.55
SYNE2-216ENST00000555002 RPL39P62891 51 aaKnown RBP5.35□□□□□ -1.55
SYNE2-216ENST00000555002 IGHV4-61A0A0C4DH41 118 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 Q8N9W7 124 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 C20orf144Q9BQM9 153 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 A4D1N5 150 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 Q8N1Y9 231 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 C2orf70A6NJV1 201 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 IGLC1P0CG04 106 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 PTPRBP23467 1997 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
SYNE2-216ENST00000555002 LGALS9O00182 355 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 RNF152Q8N8N0 203 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 TRAV26-1A0A087WT03 109 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 QRFPP83859 136 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 DEFB1P60022 68 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 PPDPFQ9H3Y8 114 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 C4orf3Q8WVX3 66 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 LY6G6EA0A0G2JKS1 128 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 BLCAPP62952 87 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 Q6ZR03 302 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 TMEM263Q8WUH6 116 aaKnown RBP5.34□□□□□ -1.55
SYNE2-216ENST00000555002 AJUBAQ96IF1 538 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 X6R8D5 127 aa5.34□□□□□ -1.55
SYNE2-216ENST00000555002 IGF2RP11717 2491 aa5.34□□□□□ -1.56
SYNE2-216ENST00000555002 LY6G6CO95867 125 aa5.34□□□□□ -1.56
SYNE2-216ENST00000555002 COL4A1P02462 1669 aa5.34□□□□□ -1.56
SYNE2-216ENST00000555002 WISP1O95388 367 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 Q6ZVH6 145 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 SPTBN4Q9H254 2564 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 PRR4Q16378 134 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 LINC01545Q5VT33 79 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-216ENST00000555002 C9orf85Q96MD7 179 aa5.33□□□□□ -1.56
SYNE2-216ENST00000555002 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-216ENST00000555002 IL15RAQ13261 267 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 FHL1Q13642 323 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 RITA1Q96K30 269 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 CSRP3P50461 194 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 DNAJC9-AS1A6NH13 148 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 K7EN84 100 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 UBE2D2P62837 147 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 NFE4Q86UQ8 179 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 LINC00311Q8N616 119 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 IGLV9-49A0A0B4J1Y8 123 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 CXCL5P42830 114 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 Q6ZS49 121 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 MIR7-3HGQ8N6C7 128 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 C15orf65H3BRN8 121 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 MTORP42345 2549 aa5.32□□□□□ -1.56
SYNE2-216ENST00000555002 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 HILS1P60008 231 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 LRP4O75096 1905 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 LYL1P12980 280 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 MYCNOSP40205 109 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 TEN1Q86WV5 123 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 FAM215AQ9Y5M1 114 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 TMEM256-PLSCR3K7ERE1 68 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 ADCYAP1P18509 176 aa5.31□□□□□ -1.56
SYNE2-216ENST00000555002 HIST2H2BDQ6DRA6 164 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms