RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CDC34P49427 236 aaPredicted RBP7.94□□□□□ -1.14
VPS29-211ENST00000553128 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
VPS29-211ENST00000553128 Q86TA4 180 aa7.94□□□□□ -1.14
VPS29-211ENST00000553128 ZFP82Q8N141 532 aa7.94□□□□□ -1.14
VPS29-211ENST00000553128 INO80EQ8NBZ0 244 aaPredicted RBP7.94□□□□□ -1.14
VPS29-211ENST00000553128 VAX2Q9UIW0 290 aa7.94□□□□□ -1.14
VPS29-211ENST00000553128 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
VPS29-211ENST00000553128 P01737 135 aa7.93□□□□□ -1.14
VPS29-211ENST00000553128 RAB24Q969Q5 203 aa7.93□□□□□ -1.14
VPS29-211ENST00000553128 TRBV25-1A0A075B6N4 114 aa7.92□□□□□ -1.14
VPS29-211ENST00000553128 A0A0U1RQV1 116 aa7.92□□□□□ -1.14
VPS29-211ENST00000553128 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
VPS29-211ENST00000553128 Q6ZRP5 223 aa7.92□□□□□ -1.14
VPS29-211ENST00000553128 PPP1R1CQ8WVI7 109 aa7.92□□□□□ -1.14
VPS29-211ENST00000553128 RPL12P30050 165 aaKnown RBP7.91□□□□□ -1.14
VPS29-211ENST00000553128 H2BFSP57053 126 aa7.91□□□□□ -1.14
VPS29-211ENST00000553128 DEFA3P59666 94 aa7.91□□□□□ -1.14
VPS29-211ENST00000553128 LINC01559Q495D7 138 aa7.91□□□□□ -1.14
VPS29-211ENST00000553128 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
VPS29-211ENST00000553128 MUC21A0A140T8X8 626 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 FAM231BA6NCW3 169 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 GAGE12HA6NDE8 117 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 LCE2BO14633 110 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 IFNA7P01567 189 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 FAM162BQ5T6X4 162 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.14
VPS29-211ENST00000553128 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
VPS29-211ENST00000553128 IGHV1-24A0A0C4DH33 117 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 F5H697 171 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 PEX7O00628 323 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 GZMBP10144 247 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 COX8CQ7Z4L0 72 aa7.89□□□□□ -1.15
VPS29-211ENST00000553128 MPC2O95563 127 aa7.88□□□□□ -1.15
VPS29-211ENST00000553128 UBE2G2P60604 165 aa7.88□□□□□ -1.15
VPS29-211ENST00000553128 SSTP61278 116 aa7.88□□□□□ -1.15
VPS29-211ENST00000553128 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
VPS29-211ENST00000553128 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
VPS29-211ENST00000553128 FAM240BA0A1B0GVZ2 78 aa7.87□□□□□ -1.15
VPS29-211ENST00000553128 A0A1W2PRE2 83 aa7.87□□□□□ -1.15
VPS29-211ENST00000553128 CXorf1O96002 111 aa7.87□□□□□ -1.15
VPS29-211ENST00000553128 AQP10Q96PS8 301 aa7.87□□□□□ -1.15
VPS29-211ENST00000553128 MUC17Q685J3 4493 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 IGKV3OR2-268A0A0C4DH90 116 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 CYCSP99999 105 aaKnown RBP7.86□□□□□ -1.15
VPS29-211ENST00000553128 PRR4Q16378 134 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 CFAP161Q6P656 301 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 LINC00526Q96FQ7 95 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
VPS29-211ENST00000553128 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
VPS29-211ENST00000553128 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
VPS29-211ENST00000553128 TRAV26-2A0A0B4J265 109 aa7.85□□□□□ -1.15
VPS29-211ENST00000553128 SULT1A2P50226 295 aa7.85□□□□□ -1.15
VPS29-211ENST00000553128 ZNF664Q8N3J9 261 aa7.85□□□□□ -1.15
VPS29-211ENST00000553128 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
VPS29-211ENST00000553128 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
VPS29-211ENST00000553128 ATP6V0CP27449 155 aa7.84□□□□□ -1.15
VPS29-211ENST00000553128 CACNG7P62955 275 aa7.84□□□□□ -1.15
VPS29-211ENST00000553128 FAM74A7A6NL05 159 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 M0QY20 66 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 SNAI2O43623 268 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 LTAP01374 205 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
VPS29-211ENST00000553128 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
VPS29-211ENST00000553128 A0A1W2PNN7 141 aa7.82□□□□□ -1.16
VPS29-211ENST00000553128 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
VPS29-211ENST00000553128 SPANXN1Q5VSR9 72 aa7.82□□□□□ -1.16
VPS29-211ENST00000553128 HIST1H2BAQ96A08 127 aa7.82□□□□□ -1.16
VPS29-211ENST00000553128 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
VPS29-211ENST00000553128 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
VPS29-211ENST00000553128 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
VPS29-211ENST00000553128 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
VPS29-211ENST00000553128 A6NHS1 94 aa7.81□□□□□ -1.16
VPS29-211ENST00000553128 PET100P0DJ07 73 aa7.81□□□□□ -1.16
VPS29-211ENST00000553128 UBE2G1P62253 170 aa7.81□□□□□ -1.16
VPS29-211ENST00000553128 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
VPS29-211ENST00000553128 PSMG3Q9BT73 122 aaPredicted RBP7.81□□□□□ -1.16
VPS29-211ENST00000553128 MT-ND6P03923 174 aa7.8□□□□□ -1.16
VPS29-211ENST00000553128 MGPP08493 103 aa7.8□□□□□ -1.16
VPS29-211ENST00000553128 FOXI1Q12951 378 aa7.8□□□□□ -1.16
VPS29-211ENST00000553128 UBE2L6O14933 153 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 MBP02144 154 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 OR5AL1P0C617 328 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 CARD19Q96LW7 228 aa7.79□□□□□ -1.16
VPS29-211ENST00000553128 CXCL1P09341 107 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 SERF2P84101 59 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 MZT2BQ6NZ67 158 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 AP1S3Q96PC3 154 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 CCDC32Q9BV29 185 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
VPS29-211ENST00000553128 AMTP48728 403 aa7.77□□□□□ -1.17
VPS29-211ENST00000553128 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
VPS29-211ENST00000553128 PGLYRP4Q96LB8 373 aa7.77□□□□□ -1.17
VPS29-211ENST00000553128 CTXND1A0A1B0GTU2 59 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms