RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 DNAJC30Q96LL9 226 aa13.22□□□□□ -0.29
GCN1-207ENST00000550471 VAX2Q9UIW0 290 aa13.22□□□□□ -0.29
GCN1-207ENST00000550471 IGKV2D-24A0A075B6R9 120 aa13.21□□□□□ -0.29
GCN1-207ENST00000550471 TMEM262E9PQX1 116 aa13.21□□□□□ -0.29
GCN1-207ENST00000550471 Q5VSD8 79 aa13.21□□□□□ -0.29
GCN1-207ENST00000550471 FER1L6-AS1Q8NA97 138 aa13.21□□□□□ -0.29
GCN1-207ENST00000550471 P01737 135 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 CRPP02741 224 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 Q8N3U1 123 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 UBE2WQ96B02 151 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 MED9Q9NWA0 146 aa13.2□□□□□ -0.3
GCN1-207ENST00000550471 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 BCL2P10415 239 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 WDR73Q6P4I2 378 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 C1orf43Q9BWL3 253 aa13.19□□□□□ -0.3
GCN1-207ENST00000550471 C19orf71A6NCJ1 209 aa13.18□□□□□ -0.3
GCN1-207ENST00000550471 TRGC1P0CF51 173 aa13.18□□□□□ -0.3
GCN1-207ENST00000550471 KIF25-AS1Q9Y6Z4 181 aa13.18□□□□□ -0.3
GCN1-207ENST00000550471 TRBV25-1A0A075B6N4 114 aa13.17□□□□□ -0.3
GCN1-207ENST00000550471 IGLV2-8P01709 118 aa13.17□□□□□ -0.3
GCN1-207ENST00000550471 CHCHD5Q9BSY4 110 aa13.17□□□□□ -0.3
GCN1-207ENST00000550471 MIAQ16674 131 aa13.16□□□□□ -0.3
GCN1-207ENST00000550471 BAALCQ8WXS3 180 aa13.16□□□□□ -0.3
GCN1-207ENST00000550471 TPPP3Q9BW30 176 aa13.16□□□□□ -0.3
GCN1-207ENST00000550471 Q6ZSA8 131 aa13.15□□□□□ -0.3
GCN1-207ENST00000550471 MUC21A0A0G2JKD1 596 aa13.14□□□□□ -0.31
GCN1-207ENST00000550471 MUC21A0A140T8X8 626 aa13.14□□□□□ -0.31
GCN1-207ENST00000550471 RAB19A4D1S5 217 aa13.14□□□□□ -0.31
GCN1-207ENST00000550471 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
GCN1-207ENST00000550471 WFDC2Q14508 124 aa13.14□□□□□ -0.31
GCN1-207ENST00000550471 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
GCN1-207ENST00000550471 M0QY20 66 aa13.13□□□□□ -0.31
GCN1-207ENST00000550471 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
GCN1-207ENST00000550471 IQCJQ1A5X6 159 aa13.13□□□□□ -0.31
GCN1-207ENST00000550471 C15orf54Q8N8G6 183 aa13.13□□□□□ -0.31
GCN1-207ENST00000550471 DPH3P1Q9H4G8 78 aa13.13□□□□□ -0.31
GCN1-207ENST00000550471 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
GCN1-207ENST00000550471 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 LECT2O14960 151 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 MGPP08493 103 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 SSTP61278 116 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 MPV17L2Q567V2 206 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 Q6ZNX1 250 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 AKAP14Q86UN6 197 aa13.12□□□□□ -0.31
GCN1-207ENST00000550471 SMR3BP02814 79 aaPredicted RBP13.11□□□□□ -0.31
GCN1-207ENST00000550471 PLA2G1BP04054 148 aaKnown RBP13.11□□□□□ -0.31
GCN1-207ENST00000550471 RASL11AQ6T310 242 aa13.11□□□□□ -0.31
GCN1-207ENST00000550471 ENHOQ6UWT2 76 aa13.11□□□□□ -0.31
GCN1-207ENST00000550471 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 GZMBP10144 247 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 LYZL1Q6UWQ5 148 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 PRR34Q9NV39 138 aa13.1□□□□□ -0.31
GCN1-207ENST00000550471 TRBV20OR9-2A0A075B6H5 130 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 CTRLP40313 264 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 SUMO4Q6EEV6 95 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 NUDT10Q8NFP7 164 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 NUDT11Q96G61 164 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
GCN1-207ENST00000550471 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
GCN1-207ENST00000550471 NTF3P20783 257 aa13.08□□□□□ -0.32
GCN1-207ENST00000550471 NTM-AS1Q6ZSK4 140 aa13.08□□□□□ -0.32
GCN1-207ENST00000550471 SMIM15Q7Z3B0 74 aa13.08□□□□□ -0.32
GCN1-207ENST00000550471 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
GCN1-207ENST00000550471 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
GCN1-207ENST00000550471 TRAV8-4A0A0B4J246 113 aa13.07□□□□□ -0.32
GCN1-207ENST00000550471 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
GCN1-207ENST00000550471 RBX1P62877 108 aa13.07□□□□□ -0.32
GCN1-207ENST00000550471 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
GCN1-207ENST00000550471 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
GCN1-207ENST00000550471 TMEM243Q9BU79 118 aa13.06□□□□□ -0.32
GCN1-207ENST00000550471 GAGE6Q13070 117 aa13.05□□□□□ -0.32
GCN1-207ENST00000550471 TWIST1Q15672 202 aa13.05□□□□□ -0.32
GCN1-207ENST00000550471 CLRN3Q8NCR9 226 aa13.05□□□□□ -0.32
GCN1-207ENST00000550471 NKX2-5P52952 324 aaPredicted RBP13.04□□□□□ -0.32
GCN1-207ENST00000550471 COTL1Q14019 142 aa13.04□□□□□ -0.32
GCN1-207ENST00000550471 LINC00269Q8N2A0 174 aa13.04□□□□□ -0.32
GCN1-207ENST00000550471 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
GCN1-207ENST00000550471 OCC1Q8TAD7 63 aa13.04□□□□□ -0.32
GCN1-207ENST00000550471 UBE2L6O14933 153 aa13.03□□□□□ -0.32
GCN1-207ENST00000550471 FAM231DQ6ZW35 169 aa13.03□□□□□ -0.32
GCN1-207ENST00000550471 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
GCN1-207ENST00000550471 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
GCN1-207ENST00000550471 A8MWL6 223 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 USP17L23D6RBM5 183 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 HLA-DQA1P01909 254 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 HAMPP81172 84 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 REG3AQ06141 175 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 CT83Q5H943 113 aa13.02□□□□□ -0.33
GCN1-207ENST00000550471 NCR2O95944 276 aa13.01□□□□□ -0.33
GCN1-207ENST00000550471 LINC00528Q8N1L1 170 aa13.01□□□□□ -0.33
GCN1-207ENST00000550471 BORCS7Q96B45 105 aa13.01□□□□□ -0.33
GCN1-207ENST00000550471 RNASE7Q9H1E1 156 aaKnown RBP13.01□□□□□ -0.33
GCN1-207ENST00000550471 K7EN84 100 aa13□□□□□ -0.33
GCN1-207ENST00000550471 GATCO43716 136 aaKnown RBP13□□□□□ -0.33
GCN1-207ENST00000550471 AMTP48728 403 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms