RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 RBM38Q9H0Z9 239 aaKnown RBP5.42□□□□□ -1.54
UBE2N-203ENST00000549490 LINC00474Q9P2X8 69 aa5.42□□□□□ -1.54
UBE2N-203ENST00000549490 ARL2-SNX15V9GYD0 113 aa5.42□□□□□ -1.54
UBE2N-203ENST00000549490 TRAV6A0A075B6T7 132 aa5.41□□□□□ -1.54
UBE2N-203ENST00000549490 IGHV1-24A0A0C4DH33 117 aa5.41□□□□□ -1.54
UBE2N-203ENST00000549490 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
UBE2N-203ENST00000549490 INO80EQ8NBZ0 244 aaPredicted RBP5.41□□□□□ -1.54
UBE2N-203ENST00000549490 SUN5Q8TC36 379 aa5.41□□□□□ -1.54
UBE2N-203ENST00000549490 SCGB1C1Q8TD33 95 aa5.41□□□□□ -1.54
UBE2N-203ENST00000549490 SDHCQ99643 169 aaPredicted RBP5.41□□□□□ -1.54
UBE2N-203ENST00000549490 TMSB15BA0A087X1C1 80 aa5.4□□□□□ -1.54
UBE2N-203ENST00000549490 A0A1B0GUV1 79 aa5.4□□□□□ -1.54
UBE2N-203ENST00000549490 SH2D1AO60880 128 aa5.4□□□□□ -1.54
UBE2N-203ENST00000549490 NOL3O60936 208 aaKnown RBP5.4□□□□□ -1.54
UBE2N-203ENST00000549490 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
UBE2N-203ENST00000549490 PLA2G10O15496 165 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 SIX6O95475 246 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 STAG3L2P0CL84 134 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 STAG3L3P0CL85 134 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 GCHFRP30047 84 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 AQP10Q96PS8 301 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 SMIM3Q9BZL3 60 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 NUDT15Q9NV35 164 aa5.39□□□□□ -1.55
UBE2N-203ENST00000549490 F5H697 171 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 MT-ND6P03923 174 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 IL7P13232 177 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 SULT1A2P50226 295 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 COX8CQ7Z4L0 72 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 Q86TA4 180 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 OR10AG1Q8NH19 301 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 WFDC1Q9HC57 220 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 HSPB11Q9Y547 144 aa5.38□□□□□ -1.55
UBE2N-203ENST00000549490 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 CDC34P49427 236 aaPredicted RBP5.37□□□□□ -1.55
UBE2N-203ENST00000549490 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 FAM162BQ5T6X4 162 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 FER1L6-AS1Q8NA97 138 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 DIRC1Q969H9 104 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 RAB24Q969Q5 203 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 TMEM243Q9BU79 118 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
UBE2N-203ENST00000549490 IGLV1-50A0A075B6I6 118 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 IGKV3OR2-268A0A0C4DH90 116 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 LYRM1O43325 122 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 H2AFB2P0C5Z0 115 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 ZNF674Q2M3X9 581 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 ZNF471Q9BX82 626 aaPredicted RBP5.36□□□□□ -1.55
UBE2N-203ENST00000549490 TMEM167BQ9NRX6 74 aa5.36□□□□□ -1.55
UBE2N-203ENST00000549490 MUC21A0A140T8X8 626 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 PEX7O00628 323 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 KRTAP1-4P0C5Y4 121 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 RPL12P30050 165 aaKnown RBP5.35□□□□□ -1.55
UBE2N-203ENST00000549490 AMTP48728 403 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 CHCHD10Q8WYQ3 142 aaPredicted RBP5.35□□□□□ -1.55
UBE2N-203ENST00000549490 CARD19Q96LW7 228 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 ZFP30Q9Y2G7 519 aa5.35□□□□□ -1.55
UBE2N-203ENST00000549490 A0A1W2PRE2 83 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 A6NHS1 94 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 H0Y9J4 135 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 M0QY20 66 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 CXorf1O96002 111 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 DEFA3P59666 94 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 SSTP61278 116 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 FOXI1Q12951 378 aa5.34□□□□□ -1.55
UBE2N-203ENST00000549490 UBE2L6O14933 153 aa5.33□□□□□ -1.56
UBE2N-203ENST00000549490 SNAI2O43623 268 aa5.33□□□□□ -1.56
UBE2N-203ENST00000549490 CYCSP99999 105 aaKnown RBP5.33□□□□□ -1.56
UBE2N-203ENST00000549490 GAGE2BQ13066 116 aa5.33□□□□□ -1.56
UBE2N-203ENST00000549490 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
UBE2N-203ENST00000549490 SPANXN1Q5VSR9 72 aa5.33□□□□□ -1.56
UBE2N-203ENST00000549490 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
UBE2N-203ENST00000549490 PPP1R1CQ8WVI7 109 aa5.33□□□□□ -1.56
UBE2N-203ENST00000549490 SSBP4Q9BWG4 385 aaPredicted RBP5.33□□□□□ -1.56
UBE2N-203ENST00000549490 TRAV1-1A0A0B4J248 108 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 TSPAN13O95857 204 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 SMIM17P0DL12 118 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 NKX2-5P52952 324 aaPredicted RBP5.32□□□□□ -1.56
UBE2N-203ENST00000549490 UBE2G2P60604 165 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 SYCNQ0VAF6 134 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 HIST1H2BAQ96A08 127 aa5.32□□□□□ -1.56
UBE2N-203ENST00000549490 IGHV1-58A0A0C4DH39 117 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 MPC2O95563 127 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 CXCL1P09341 107 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 OR5AL1P0C617 328 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 ATP6V0CP27449 155 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 UBE2D1P51668 147 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 H2BFSP57053 126 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 FMC1Q96HJ9 113 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 PGLYRP4Q96LB8 373 aa5.31□□□□□ -1.56
UBE2N-203ENST00000549490 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
UBE2N-203ENST00000549490 CCDC160A6NGH7 325 aa5.3□□□□□ -1.56
UBE2N-203ENST00000549490 FAM74A7A6NL05 159 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms