RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SULT1A2P50226 295 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 PKIAP61925 76 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 Q6ZNX1 250 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 DNAJC30Q96LL9 226 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 TPPP3Q9BW30 176 aa13.12□□□□□ -0.31
CHD4-213ENST00000545584 PDE6DO43924 150 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 CRPP02741 224 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 GNG4P50150 75 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 FER1L6-AS1Q8NA97 138 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 FAM30AQ9NZY2 134 aa13.11□□□□□ -0.31
CHD4-213ENST00000545584 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
CHD4-213ENST00000545584 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
CHD4-213ENST00000545584 C1orf43Q9BWL3 253 aa13.1□□□□□ -0.31
CHD4-213ENST00000545584 BIN3Q9NQY0 253 aa13.1□□□□□ -0.31
CHD4-213ENST00000545584 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 GZMBP10144 247 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 CACNG7P62955 275 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 ATRAIDQ6UW56 229 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 C15orf54Q8N8G6 183 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 KIF25-AS1Q9Y6Z4 181 aa13.09□□□□□ -0.31
CHD4-213ENST00000545584 H7C1H1 209 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 P01737 135 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 ANGP03950 147 aaKnown RBP13.08□□□□□ -0.32
CHD4-213ENST00000545584 MGPP08493 103 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 SLC51BQ86UW2 128 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 VAX2Q9UIW0 290 aa13.08□□□□□ -0.32
CHD4-213ENST00000545584 C19orf71A6NCJ1 209 aa13.07□□□□□ -0.32
CHD4-213ENST00000545584 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
CHD4-213ENST00000545584 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
CHD4-213ENST00000545584 F2Z2F3 143 aa13.06□□□□□ -0.32
CHD4-213ENST00000545584 BCL2P10415 239 aa13.06□□□□□ -0.32
CHD4-213ENST00000545584 TAGLN2P37802 199 aaKnown RBP13.06□□□□□ -0.32
CHD4-213ENST00000545584 Q6ZSA8 131 aa13.06□□□□□ -0.32
CHD4-213ENST00000545584 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
CHD4-213ENST00000545584 TRBV25-1A0A075B6N4 114 aa13.05□□□□□ -0.32
CHD4-213ENST00000545584 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
CHD4-213ENST00000545584 TRGC1P0CF51 173 aa13.04□□□□□ -0.32
CHD4-213ENST00000545584 MIAQ16674 131 aa13.04□□□□□ -0.32
CHD4-213ENST00000545584 NTM-AS1Q6ZSK4 140 aa13.04□□□□□ -0.32
CHD4-213ENST00000545584 FAT1Q14517 4588 aa13.04□□□□□ -0.32
CHD4-213ENST00000545584 M0QY20 66 aa13.03□□□□□ -0.32
CHD4-213ENST00000545584 GAGE6Q13070 117 aa13.03□□□□□ -0.32
CHD4-213ENST00000545584 LINC01620Q4KN68 170 aa13.03□□□□□ -0.32
CHD4-213ENST00000545584 AKAP14Q86UN6 197 aa13.03□□□□□ -0.32
CHD4-213ENST00000545584 IGHV1-24A0A0C4DH33 117 aa13.02□□□□□ -0.33
CHD4-213ENST00000545584 PLA2G1BP04054 148 aaKnown RBP13.02□□□□□ -0.33
CHD4-213ENST00000545584 SUMO4Q6EEV6 95 aa13.02□□□□□ -0.33
CHD4-213ENST00000545584 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 HLA-DQA1P01909 254 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 RBX1P62877 108 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 IQCJQ1A5X6 159 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
CHD4-213ENST00000545584 RASL11AQ6T310 242 aa13□□□□□ -0.33
CHD4-213ENST00000545584 LINC00528Q8N1L1 170 aa13□□□□□ -0.33
CHD4-213ENST00000545584 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
CHD4-213ENST00000545584 NTF3P20783 257 aa12.99□□□□□ -0.33
CHD4-213ENST00000545584 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
CHD4-213ENST00000545584 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
CHD4-213ENST00000545584 NUDT10Q8NFP7 164 aa12.99□□□□□ -0.33
CHD4-213ENST00000545584 NUDT11Q96G61 164 aa12.99□□□□□ -0.33
CHD4-213ENST00000545584 DMBT1Q9UGM3 2413 aaPredicted RBP12.98□□□□□ -0.33
CHD4-213ENST00000545584 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
CHD4-213ENST00000545584 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
CHD4-213ENST00000545584 SCXQ7RTU7 201 aa12.98□□□□□ -0.33
CHD4-213ENST00000545584 LINC00269Q8N2A0 174 aa12.98□□□□□ -0.33
CHD4-213ENST00000545584 PRR34Q9NV39 138 aa12.98□□□□□ -0.33
CHD4-213ENST00000545584 USP17L23D6RBM5 183 aa12.97□□□□□ -0.33
CHD4-213ENST00000545584 CTRLP40313 264 aa12.97□□□□□ -0.33
CHD4-213ENST00000545584 TMEM243Q9BU79 118 aa12.97□□□□□ -0.33
CHD4-213ENST00000545584 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
CHD4-213ENST00000545584 RPP21Q9H633 154 aaKnown RBP12.97□□□□□ -0.33
CHD4-213ENST00000545584 NIT2Q9NQR4 276 aa12.97□□□□□ -0.33
CHD4-213ENST00000545584 SRRM2Q9UQ35 2752 aaKnown RBP12.97□□□□□ -0.33
CHD4-213ENST00000545584 TWIST1Q15672 202 aa12.96□□□□□ -0.33
CHD4-213ENST00000545584 BLOC1S1P78537 153 aa12.95□□□□□ -0.34
CHD4-213ENST00000545584 OCC1Q8TAD7 63 aa12.95□□□□□ -0.34
CHD4-213ENST00000545584 RNASE7Q9H1E1 156 aaKnown RBP12.95□□□□□ -0.34
CHD4-213ENST00000545584 UBE2L6O14933 153 aa12.94□□□□□ -0.34
CHD4-213ENST00000545584 REG3AQ06141 175 aa12.94□□□□□ -0.34
CHD4-213ENST00000545584 PGLYRP4Q96LB8 373 aa12.94□□□□□ -0.34
CHD4-213ENST00000545584 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
CHD4-213ENST00000545584 VPS13BQ7Z7G8 4022 aa12.94□□□□□ -0.34
CHD4-213ENST00000545584 COTL1Q14019 142 aa12.93□□□□□ -0.34
CHD4-213ENST00000545584 ALKAL2Q6UX46 152 aa12.93□□□□□ -0.34
CHD4-213ENST00000545584 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
CHD4-213ENST00000545584 TRAV8-4A0A0B4J246 113 aa12.92□□□□□ -0.34
CHD4-213ENST00000545584 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
CHD4-213ENST00000545584 K7EN84 100 aa12.92□□□□□ -0.34
CHD4-213ENST00000545584 DGAT2L7PQ6IED9 249 aa12.92□□□□□ -0.34
CHD4-213ENST00000545584 CIRBP-AS1Q8TBR5 109 aa12.92□□□□□ -0.34
CHD4-213ENST00000545584 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
CHD4-213ENST00000545584 PRSS1P07477 247 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms