RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
MSH2-206ENST00000543555 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
MSH2-206ENST00000543555 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 DEFB104AQ8WTQ1 72 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 MAP6D1Q9H9H5 199 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 H3BRM9 83 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
MSH2-206ENST00000543555 WNK1Q9H4A3 2382 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 TSHBP01222 138 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 AMMECR1LQ6DCA0 310 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 TRPT1Q86TN4 253 aaKnown RBP10.22□□□□□ -0.77
MSH2-206ENST00000543555 ESM1Q9NQ30 184 aa10.22□□□□□ -0.77
MSH2-206ENST00000543555 HTN1P15515 57 aa10.21□□□□□ -0.78
MSH2-206ENST00000543555 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
MSH2-206ENST00000543555 OR4C5Q8NGB2 326 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 CD300EQ496F6 205 aaPredicted RBP10.2□□□□□ -0.78
MSH2-206ENST00000543555 JMJD8Q96S16 334 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 GCSHP23434 173 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 TIMM17AQ99595 171 aa10.2□□□□□ -0.78
MSH2-206ENST00000543555 SPAG8Q99932 426 aaPredicted RBP10.2□□□□□ -0.78
MSH2-206ENST00000543555 C9orf118A6NHY6 69 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 OR11H12B2RN74 326 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 OR11H2Q8NH07 326 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 TENM1Q9UKZ4 2725 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 SORL1Q92673 2214 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 FXYD2P54710 66 aa10.19□□□□□ -0.78
MSH2-206ENST00000543555 PMVKQ15126 192 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 C11orf44Q8N8P7 122 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 E9PLD3 99 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 FHL3Q13643 280 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 RHOHQ15669 191 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
MSH2-206ENST00000543555 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 K7EP13 123 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 PRM2P04554 102 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 EDA2RQ9HAV5 297 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 CD28P10747 220 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 CEND1Q8N111 149 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
MSH2-206ENST00000543555 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 I3L3M4 83 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 M0R2P5 195 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 TRAV25A0A0B4J276 109 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 H3BUT2 72 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 CCL24O00175 119 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 TAL2Q16559 108 aa10.16□□□□□ -0.78
MSH2-206ENST00000543555 SMIM13P0DJ93 91 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 P0DMU3 169 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 IGHV3-73A0A0B4J1V6 119 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 A8MWV9 139 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.78
MSH2-206ENST00000543555 INSP01308 110 aa10.15□□□□□ -0.79
MSH2-206ENST00000543555 EMP1P54849 157 aa10.15□□□□□ -0.79
MSH2-206ENST00000543555 LINC01587Q99440 93 aa10.15□□□□□ -0.79
MSH2-206ENST00000543555 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.79
MSH2-206ENST00000543555 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 PTH2Q96A98 100 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 CLUHP3Q96NS8 147 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 CITED2Q99967 270 aaPredicted RBP10.14□□□□□ -0.79
MSH2-206ENST00000543555 PROK1P58294 105 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 C11orf72Q8NBR9 251 aa10.14□□□□□ -0.79
MSH2-206ENST00000543555 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
MSH2-206ENST00000543555 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
MSH2-206ENST00000543555 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
MSH2-206ENST00000543555 HIST1H4GQ99525 98 aa10.13□□□□□ -0.79
MSH2-206ENST00000543555 FBN1P35555 2871 aaKnown RBP10.13□□□□□ -0.79
MSH2-206ENST00000543555 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 NHP2Q9NX24 153 aaKnown RBP10.12□□□□□ -0.79
MSH2-206ENST00000543555 TSSC4Q9Y5U2 329 aaPredicted RBP10.12□□□□□ -0.79
MSH2-206ENST00000543555 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 HERVK_113P61574 105 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 K7ERJ3 54 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 GTF2H5Q6ZYL4 71 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 STHQ8IWL8 128 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
MSH2-206ENST00000543555 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
MSH2-206ENST00000543555 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
MSH2-206ENST00000543555 A0A1W2PPM0 123 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms