RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZFAND2AQ8N6M9 145 aa6.23□□□□□ -1.41
PRKAB1-207ENST00000542698 CRPP02741 224 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 FOXI1Q12951 378 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 MRGPRG-AS1Q2M3A8 158 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 NEXN-AS1Q8NBZ9 246 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 C10orf105Q8TEF2 133 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 SPAG8Q99932 426 aaPredicted RBP6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 MDFICQ9P1T7 246 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 PAX4O43316 350 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 PTPRBP23467 1997 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 NRACQ8N912 160 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 HHLA3Q9XRX5 114 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 A0A096LNJ9 63 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 J3QKU1 62 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 J3QLI3 93 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 GAGE4Q13068 117 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 GAGE5Q13069 117 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 TMEM86BQ8N661 226 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 PIFOQ8TCI5 191 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 C20orf173Q96LM9 149 aa6.22□□□□□ -1.41
PRKAB1-207ENST00000542698 C11orf71Q6IPW1 123 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 DMDP11532 3685 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 ANKRD29Q8N6D5 301 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 PTH2Q96A98 100 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 RPL35AP18077 110 aaKnown RBP6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 OPRPNQ99935 248 aaPredicted RBP6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 VPREB3Q9UKI3 123 aa6.21□□□□□ -1.42
PRKAB1-207ENST00000542698 ABCA12Q86UK0 2595 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 A0A0J9YX75 114 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 F8W735 103 aaPredicted RBP6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 NDUFA11Q86Y39 141 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 COX8CQ7Z4L0 72 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 A6NDX4 124 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 HERVK_113P63121 156 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 EPG5Q9HCE0 2579 aa6.2□□□□□ -1.42
PRKAB1-207ENST00000542698 FASNP49327 2511 aaKnown RBP6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 U3KQE9 123 aa6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 IGHV4-4A0A075B6R2 117 aa6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 CLPSL1A2RUU4 121 aa6.19□□□□□ -1.42
PRKAB1-207ENST00000542698 MALP21145 153 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 UFSP1Q6NVU6 142 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 Q6ZQT7 251 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 Q9H8V8 135 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 A0A0J9YY99 117 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 PRR9Q5T870 116 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 SLC25A29Q8N8R3 303 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 FREM2Q5SZK8 3169 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 IGHV4OR15-8A0A075B7B6 117 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 A0A087WW49 117 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 IFITM1P13164 125 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 SLURP1P55000 103 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 CFHR3Q02985 330 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 CDSNQ15517 529 aa6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 C11orf68Q9H3H3 251 aaKnown RBP6.18□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE7O76087 117 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE12FP0CL80 117 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE12GP0CL81 117 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE12IP0CL82 117 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 DEFB130BP0DP73 79 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 DEFB130AP0DP74 79 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 NSUN5P1Q3KNT7 163 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 C15orf53Q8NAA6 179 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 RAI1Q7Z5J4 1906 aaPredicted RBP6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 HTN3P15516 51 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 ATP6V0E2Q8NHE4 81 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 TCL1BO95988 128 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
PRKAB1-207ENST00000542698 IGHG4P01861 327 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 PFN2P35080 140 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 PCSK5Q92824 1860 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 ZMAT4Q9H898 229 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 FN1P02751 2386 aaKnown RBP6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 COL6A3P12111 3177 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 TMEM89A2RUT3 159 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 CRYBA4P53673 196 aa6.16□□□□□ -1.42
PRKAB1-207ENST00000542698 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 K7EQG2 157 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms