RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 TIMM17AQ99595 171 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 SELENOKQ9Y6D0 94 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 SVEP1Q4LDE5 3571 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 ABCA12Q86UK0 2595 aa3.86□□□□□ -1.79
ATPAF1-212ENST00000542495 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 A0A0J9YX75 114 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 C11orf86A6NJI1 115 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 B4DSR2 109 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 K7EQG2 157 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 SRD5A1P18405 259 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 UBE2D1P51668 147 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 ATP5J2P56134 94 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 PMVKQ15126 192 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 DGAT2L7PQ6IED9 249 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 MORN3Q6PF18 240 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 JPT2Q9H910 190 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 SPANXB1Q9NS25 103 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 PRO0461Q9UI25 63 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 TP53TG1Q9Y2A0 90 aa3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 TEP1Q99973 2627 aaKnown RBP3.85□□□□□ -1.79
ATPAF1-212ENST00000542495 A0A096LNT2 108 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 TRAV12-3A0A0B4J271 114 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 TEX48A0A1B0GUV7 120 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 M0QY20 66 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 CD7P09564 240 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 DSCR9P59020 149 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 RHOHQ15669 191 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 ZNF256Q9Y2P7 627 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 AGRNO00468 2067 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 APCP25054 2843 aa3.84□□□□□ -1.79
ATPAF1-212ENST00000542495 ZFHX3Q15911 3703 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 A0A0J9YY99 117 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV4-59P01825 116 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 WFDC2Q14508 124 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 DEFB112Q30KQ8 113 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 AMTNQ6UX39 209 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 NFE4Q86UQ8 179 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 SYT8Q8NBV8 401 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 AMELXQ99217 191 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 KIR2DL4Q99706 377 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 EDA2RQ9HAV5 297 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 MDFICQ9P1T7 246 aa3.84□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV1OR15-1A0A075B7D0 117 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 A8MTW9 85 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 H3BMG7 143 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 J3QLI3 93 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 FSHBP01225 129 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 ZNF688P0C7X2 276 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 P0DMU3 169 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 FAM231AP0DMU4 169 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 FAM231CP0DMU5 169 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 TSPEAR-AS2P59090 65 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 HERVK_113P61574 105 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 SNRPD3P62318 126 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 CD300EQ496F6 205 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 C10orf99Q6UWK7 81 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 TRPT1Q86TN4 253 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 SLC25A29Q8N8R3 303 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 KLHL30-AS1Q8NEE0 82 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 ZNRF2Q8NHG8 242 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 OTOGQ6ZRI0 2925 aa3.83□□□□□ -1.8
ATPAF1-212ENST00000542495 A0A1W2PRX2 142 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 F5H697 171 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 ELANEP08246 267 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 UBE2D3P61077 147 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 UBE2D2P62837 147 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 RPL24P83731 157 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 LINC01356Q8N9X3 169 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 PDZD2O15018 2839 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 CSMD2Q7Z408 3487 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 C2CD3Q4AC94 2353 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 AKAP6Q13023 2319 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 FBN2P35556 2912 aa3.82□□□□□ -1.8
ATPAF1-212ENST00000542495 TRAV12-2A0A075B6T6 113 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 TMEM223A0PJW6 202 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 TSPAN13O95857 204 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV3-30P01768 117 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV3-30-5P0DP03 117 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SCGB2A2Q13296 93 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SPINK13Q1W4C9 94 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 CFAP126Q5VTH2 177 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 C20orf203Q8NBC4 194 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 ZNF702PQ9H963 129 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 F8P00451 2351 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 AKAP9Q99996 3911 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 ANKRD17O75179 2603 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 POLQO75417 2590 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 TRGV11A0A075B6L2 103 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms