RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CTRLP40313 264 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 FXYD7P58549 80 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 SEC11AP67812 179 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 HIST1H1AQ02539 215 aaPredicted RBP3.83□□□□□ -1.8
CPSF7-220ENST00000541963 SPATA45Q537H7 98 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 GDF5OSQ5U4N7 250 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 Q6ZN92 141 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 NIT1Q86X76 327 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 RNF182Q8N6D2 247 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 Q8NAQ8 132 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 OR8A1Q8NGG7 326 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 OR10J6PQ8NGY7 276 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 SFRP2Q96HF1 295 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 KCNS1Q96KK3 526 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 IGF2BP2-AS1Q96M15 143 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 NPCDR1Q9BY65 106 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 WDR61Q9GZS3 305 aaKnown RBP3.83□□□□□ -1.8
CPSF7-220ENST00000541963 ZNF331Q9NQX6 463 aaPredicted RBP3.83□□□□□ -1.8
CPSF7-220ENST00000541963 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 RFNGQ9Y644 331 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 AGRNO00468 2067 aa3.83□□□□□ -1.8
CPSF7-220ENST00000541963 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV10A0A0B4J240 114 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV5A0A0B4J249 113 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 A8MTW9 85 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 MRPS12O15235 138 aaKnown RBP3.82□□□□□ -1.8
CPSF7-220ENST00000541963 CCL25O15444 150 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 OR10J4P0C629 311 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 RBMY1A1P0DJD3 496 aaKnown RBP3.82□□□□□ -1.8
CPSF7-220ENST00000541963 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 HLA-DMBP28068 263 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 TAS2R45P59539 299 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 DEFB1P60022 68 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 CCL20P78556 96 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 PDE6HQ13956 83 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
CPSF7-220ENST00000541963 VAMP3Q15836 100 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 RRN3P1Q2M238 152 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 BAGE3Q86Y29 109 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 BAGE2Q86Y30 109 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 TMEM256Q8N2U0 113 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 OR10G9Q8NGN4 311 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 RASL10AQ92737 203 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 LINC01587Q99440 93 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 MRPL32Q9BYC8 188 aaKnown RBP3.82□□□□□ -1.8
CPSF7-220ENST00000541963 CST9LQ9H4G1 147 aa3.82□□□□□ -1.8
CPSF7-220ENST00000541963 KMT2CQ8NEZ4 4911 aaKnown RBP3.81□□□□□ -1.8
CPSF7-220ENST00000541963 TRBV19A0A075B6N1 114 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV9-2A0A087WT02 112 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 LY6G6CO95867 125 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 GPX1P07203 203 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 OR5AL1P0C617 328 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 LEPP41159 167 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 CSN1S1P47710 185 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 EMP1P54849 157 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 BATFQ16520 125 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 SPINK13Q1W4C9 94 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 BLNKQ8WV28 456 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 LINC00477Q96M19 166 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 AP1S3Q96PC3 154 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 PAXXQ9BUH6 204 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 IL36BQ9NZH7 164 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 RPH3ALQ9UNE2 315 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 STARD9Q9P2P6 4700 aa3.81□□□□□ -1.8
CPSF7-220ENST00000541963 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 A6NDN8 102 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 IGLL5B9A064 214 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 H3BTX0 84 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 M0R2Z0 102 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 OR7C2O60412 319 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 ZNF324O75467 553 aaPredicted RBP3.8□□□□□ -1.8
CPSF7-220ENST00000541963 C12orf74Q32Q52 190 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 LGALS9CQ6DKI2 356 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 AMTNQ6UX39 209 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 ZNF493Q6ZR52 646 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 MIR17HGQ75NE6 70 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 C1orf158Q8N1D5 194 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 LYPD1Q8N2G4 141 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 RPP25LQ8N5L8 163 aaKnown RBP3.8□□□□□ -1.8
CPSF7-220ENST00000541963 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 SLC25A2Q9BXI2 301 aa3.8□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 LYRM9A8MSI8 78 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 SLC17A3O00476 420 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 CRXO43186 299 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-220ENST00000541963 SERF1AO75920 110 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 SLC25A5P05141 298 aaKnown RBP3.79□□□□□ -1.8
CPSF7-220ENST00000541963 PYYP10082 97 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 HTN1P15515 57 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 CDC34P49427 236 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-220ENST00000541963 KRTDAPP60985 99 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 DAD1P61803 113 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 GCSAMLQ5JQS6 135 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 FAM222AQ5U5X8 452 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 ATP5L2Q7Z4Y8 100 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms