RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RBFOX3A6NFN3 312 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 LECT2O14960 151 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 IGLC6P0CF74 106 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 BCL2P10415 239 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 SSTP61278 116 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 ATRAIDQ6UW56 229 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 OR2D3Q8NGH3 330 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 BAALCQ8WXS3 180 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
CHFR-217ENST00000540537 RAB19A4D1S5 217 aa13.83□□□□□ -0.2
CHFR-217ENST00000540537 GZMBP10144 247 aa13.83□□□□□ -0.2
CHFR-217ENST00000540537 TMEM97Q5BJF2 176 aa13.83□□□□□ -0.2
CHFR-217ENST00000540537 FER1L6-AS1Q8NA97 138 aa13.83□□□□□ -0.2
CHFR-217ENST00000540537 VAX2Q9UIW0 290 aa13.83□□□□□ -0.2
CHFR-217ENST00000540537 TMEM262E9PQX1 116 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 SMR3BP02814 79 aaPredicted RBP13.82□□□□□ -0.2
CHFR-217ENST00000540537 PKIAP61925 76 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 HAMPP81172 84 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 Q0VG73 95 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 TPPP3Q9BW30 176 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 MED9Q9NWA0 146 aa13.82□□□□□ -0.2
CHFR-217ENST00000540537 TRBV20OR9-2A0A075B6H5 130 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 XKRY2A2RUG3 117 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 P01737 135 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 INAFM2P0DMQ5 153 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 TAGLN2P37802 199 aaKnown RBP13.81□□□□□ -0.2
CHFR-217ENST00000540537 CACNG7P62955 275 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 Q6ZNX1 250 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 Q8N976 141 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
CHFR-217ENST00000540537 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.8□□□□□ -0.2
CHFR-217ENST00000540537 MPV17L2Q567V2 206 aa13.79□□□□□ -0.2
CHFR-217ENST00000540537 Q6ZSA8 131 aa13.79□□□□□ -0.2
CHFR-217ENST00000540537 CHCHD5Q9BSY4 110 aa13.79□□□□□ -0.2
CHFR-217ENST00000540537 F2Z2F3 143 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 FAM229AH3BQW9 127 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 H7C1H1 209 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 ENHOQ6UWT2 76 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 C15orf54Q8N8G6 183 aa13.78□□□□□ -0.2
CHFR-217ENST00000540537 M0QY20 66 aa13.77□□□□□ -0.21
CHFR-217ENST00000540537 CRPP02741 224 aa13.77□□□□□ -0.21
CHFR-217ENST00000540537 MGPP08493 103 aa13.77□□□□□ -0.21
CHFR-217ENST00000540537 C1orf43Q9BWL3 253 aa13.77□□□□□ -0.21
CHFR-217ENST00000540537 SRRM2Q9UQ35 2752 aaKnown RBP13.76□□□□□ -0.21
CHFR-217ENST00000540537 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
CHFR-217ENST00000540537 C9orf62Q8N4C0 152 aa13.76□□□□□ -0.21
CHFR-217ENST00000540537 TRBV25-1A0A075B6N4 114 aa13.75□□□□□ -0.21
CHFR-217ENST00000540537 TRGC1P0CF51 173 aa13.75□□□□□ -0.21
CHFR-217ENST00000540537 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
CHFR-217ENST00000540537 LYZL1Q6UWQ5 148 aa13.75□□□□□ -0.21
CHFR-217ENST00000540537 AKAP14Q86UN6 197 aa13.75□□□□□ -0.21
CHFR-217ENST00000540537 IQCJQ1A5X6 159 aa13.74□□□□□ -0.21
CHFR-217ENST00000540537 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
CHFR-217ENST00000540537 WDR73Q6P4I2 378 aa13.74□□□□□ -0.21
CHFR-217ENST00000540537 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
CHFR-217ENST00000540537 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
CHFR-217ENST00000540537 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
CHFR-217ENST00000540537 CTRLP40313 264 aa13.73□□□□□ -0.21
CHFR-217ENST00000540537 MIAQ16674 131 aa13.73□□□□□ -0.21
CHFR-217ENST00000540537 DPH3P1Q9H4G8 78 aa13.73□□□□□ -0.21
CHFR-217ENST00000540537 FLG2Q5D862 2391 aaPredicted RBP13.72□□□□□ -0.21
CHFR-217ENST00000540537 NTF3P20783 257 aa13.72□□□□□ -0.21
CHFR-217ENST00000540537 RBX1P62877 108 aa13.72□□□□□ -0.21
CHFR-217ENST00000540537 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
CHFR-217ENST00000540537 BLOC1S1P78537 153 aa13.71□□□□□ -0.21
CHFR-217ENST00000540537 GAGE6Q13070 117 aa13.71□□□□□ -0.21
CHFR-217ENST00000540537 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
CHFR-217ENST00000540537 CNFNQ9BYD5 112 aa13.71□□□□□ -0.21
CHFR-217ENST00000540537 RPP21Q9H633 154 aaKnown RBP13.71□□□□□ -0.21
CHFR-217ENST00000540537 MYCBP2O75592 4640 aa13.71□□□□□ -0.21
CHFR-217ENST00000540537 DMBT1Q9UGM3 2413 aaPredicted RBP13.71□□□□□ -0.22
CHFR-217ENST00000540537 K7EN84 100 aa13.7□□□□□ -0.22
CHFR-217ENST00000540537 NKX2-5P52952 324 aaPredicted RBP13.7□□□□□ -0.22
CHFR-217ENST00000540537 LINC01620Q4KN68 170 aa13.7□□□□□ -0.22
CHFR-217ENST00000540537 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
CHFR-217ENST00000540537 HERC1Q15751 4861 aa13.7□□□□□ -0.22
CHFR-217ENST00000540537 TMEM250H0YL14 139 aa13.69□□□□□ -0.22
CHFR-217ENST00000540537 ALKAL2Q6UX46 152 aa13.69□□□□□ -0.22
CHFR-217ENST00000540537 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
CHFR-217ENST00000540537 NIT2Q9NQR4 276 aa13.69□□□□□ -0.22
CHFR-217ENST00000540537 hCG_2014768A0A024R1R8 64 aa13.68□□□□□ -0.22
CHFR-217ENST00000540537 LINC00269Q8N2A0 174 aa13.68□□□□□ -0.22
CHFR-217ENST00000540537 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
CHFR-217ENST00000540537 PGLYRP4Q96LB8 373 aa13.68□□□□□ -0.22
CHFR-217ENST00000540537 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
CHFR-217ENST00000540537 TWIST1Q15672 202 aa13.67□□□□□ -0.22
CHFR-217ENST00000540537 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
CHFR-217ENST00000540537 CLPSL2Q6UWE3 100 aa13.66□□□□□ -0.22
CHFR-217ENST00000540537 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
CHFR-217ENST00000540537 PLA2G1BP04054 148 aaKnown RBP13.65□□□□□ -0.22
CHFR-217ENST00000540537 SCXQ7RTU7 201 aa13.65□□□□□ -0.22
CHFR-217ENST00000540537 LINC00528Q8N1L1 170 aa13.65□□□□□ -0.22
CHFR-217ENST00000540537 A0A1B0GUV1 79 aa13.64□□□□□ -0.23
CHFR-217ENST00000540537 REG3AQ06141 175 aa13.64□□□□□ -0.23
CHFR-217ENST00000540537 KRTAP26-1Q6PEX3 210 aa13.64□□□□□ -0.23
CHFR-217ENST00000540537 FAM231DQ6ZW35 169 aa13.64□□□□□ -0.23
CHFR-217ENST00000540537 CHAC1Q9BUX1 264 aa13.64□□□□□ -0.23
CHFR-217ENST00000540537 C20orf203Q8NBC4 194 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms