RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 P01737 135 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 DNAJC30Q96LL9 226 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 TPPP3Q9BW30 176 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 BIN3Q9NQY0 253 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
RAP1B-221ENST00000540209 DNAH8Q96JB1 4490 aa12.83□□□□□ -0.36
RAP1B-221ENST00000540209 XKRY2A2RUG3 117 aa12.82□□□□□ -0.36
RAP1B-221ENST00000540209 CACNG7P62955 275 aa12.82□□□□□ -0.36
RAP1B-221ENST00000540209 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
RAP1B-221ENST00000540209 F2Z2F3 143 aa12.81□□□□□ -0.36
RAP1B-221ENST00000540209 ELOBQ15370 118 aa12.81□□□□□ -0.36
RAP1B-221ENST00000540209 ATRAIDQ6UW56 229 aa12.81□□□□□ -0.36
RAP1B-221ENST00000540209 RMI2Q96E14 147 aa12.81□□□□□ -0.36
RAP1B-221ENST00000540209 M0QY20 66 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 LECT2O14960 151 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 NTM-AS1Q6ZSK4 140 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
RAP1B-221ENST00000540209 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 TMEM70Q9BUB7 260 aa12.8□□□□□ -0.36
RAP1B-221ENST00000540209 HERC1Q15751 4861 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 K7EN84 100 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 MGPP08493 103 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 CTRLP40313 264 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 BLOC1S1P78537 153 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 MPV17L2Q567V2 206 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 UBE2WQ96B02 151 aa12.79□□□□□ -0.36
RAP1B-221ENST00000540209 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 EPM2AB3EWF7 344 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 TMEM262E9PQX1 116 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 TMEM250H0YL14 139 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
RAP1B-221ENST00000540209 SRRM2Q9UQ35 2752 aaKnown RBP12.77□□□□□ -0.36
RAP1B-221ENST00000540209 VPS13BQ7Z7G8 4022 aa12.77□□□□□ -0.36
RAP1B-221ENST00000540209 H7C1H1 209 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 TRGC1P0CF51 173 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 NTF3P20783 257 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 Q0VG73 95 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 CHCHD5Q9BSY4 110 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 CNFNQ9BYD5 112 aa12.77□□□□□ -0.37
RAP1B-221ENST00000540209 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.37
RAP1B-221ENST00000540209 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
RAP1B-221ENST00000540209 PKIAP61925 76 aa12.76□□□□□ -0.37
RAP1B-221ENST00000540209 WDR73Q6P4I2 378 aa12.76□□□□□ -0.37
RAP1B-221ENST00000540209 ENHOQ6UWT2 76 aa12.76□□□□□ -0.37
RAP1B-221ENST00000540209 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
RAP1B-221ENST00000540209 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
RAP1B-221ENST00000540209 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
RAP1B-221ENST00000540209 TRBV25-1A0A075B6N4 114 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
RAP1B-221ENST00000540209 HAMPP81172 84 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 Q5VSD8 79 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 RASL11AQ6T310 242 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 Q8N976 141 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 FAM30AQ9NZY2 134 aa12.74□□□□□ -0.37
RAP1B-221ENST00000540209 CRPP02741 224 aa12.73□□□□□ -0.37
RAP1B-221ENST00000540209 NKX2-5P52952 324 aaPredicted RBP12.73□□□□□ -0.37
RAP1B-221ENST00000540209 C1orf43Q9BWL3 253 aa12.73□□□□□ -0.37
RAP1B-221ENST00000540209 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
RAP1B-221ENST00000540209 Q6ZSA8 131 aa12.72□□□□□ -0.37
RAP1B-221ENST00000540209 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
RAP1B-221ENST00000540209 FRZBQ92765 325 aa12.72□□□□□ -0.37
RAP1B-221ENST00000540209 PRR34Q9NV39 138 aa12.72□□□□□ -0.37
RAP1B-221ENST00000540209 IGHV1-24A0A0C4DH33 117 aa12.71□□□□□ -0.37
RAP1B-221ENST00000540209 SMR3BP02814 79 aaPredicted RBP12.71□□□□□ -0.37
RAP1B-221ENST00000540209 RBX1P62877 108 aa12.71□□□□□ -0.37
RAP1B-221ENST00000540209 TWIST1Q15672 202 aa12.71□□□□□ -0.37
RAP1B-221ENST00000540209 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.37
RAP1B-221ENST00000540209 NIT2Q9NQR4 276 aa12.71□□□□□ -0.37
RAP1B-221ENST00000540209 GAGE6Q13070 117 aa12.7□□□□□ -0.38
RAP1B-221ENST00000540209 MIAQ16674 131 aa12.7□□□□□ -0.38
RAP1B-221ENST00000540209 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
RAP1B-221ENST00000540209 NDUFS6O75380 124 aaKnown RBP12.69□□□□□ -0.38
RAP1B-221ENST00000540209 CEBPGP53567 150 aa12.68□□□□□ -0.38
RAP1B-221ENST00000540209 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
RAP1B-221ENST00000540209 EIF5A2Q9GZV4 153 aaKnown RBP12.68□□□□□ -0.38
RAP1B-221ENST00000540209 MYCBP2O75592 4640 aa12.68□□□□□ -0.38
RAP1B-221ENST00000540209 GATCO43716 136 aaKnown RBP12.67□□□□□ -0.38
RAP1B-221ENST00000540209 LINC01620Q4KN68 170 aa12.67□□□□□ -0.38
RAP1B-221ENST00000540209 LINC00269Q8N2A0 174 aa12.67□□□□□ -0.38
RAP1B-221ENST00000540209 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
RAP1B-221ENST00000540209 DMBT1Q9UGM3 2413 aaPredicted RBP12.66□□□□□ -0.38
RAP1B-221ENST00000540209 A8MWL6 223 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 CT83Q5H943 113 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 KRTAP26-1Q6PEX3 210 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 CLPSL2Q6UWE3 100 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
RAP1B-221ENST00000540209 TRAV26-2A0A0B4J265 109 aa12.65□□□□□ -0.38
RAP1B-221ENST00000540209 FAM229AH3BQW9 127 aa12.65□□□□□ -0.38
RAP1B-221ENST00000540209 HLA-DQA1P01909 254 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms