RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 DPH3Q96FX2 82 aa12.67□□□□□ -0.38
LPCAT3-210ENST00000540090 RNF185Q96GF1 192 aa12.67□□□□□ -0.38
LPCAT3-210ENST00000540090 A0A087WYN8 130 aa12.66□□□□□ -0.38
LPCAT3-210ENST00000540090 RPL7L1Q6DKI1 246 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-210ENST00000540090 DERL1Q9BUN8 251 aa12.66□□□□□ -0.38
LPCAT3-210ENST00000540090 ZNF471Q9BX82 626 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-210ENST00000540090 A6NHS1 94 aa12.65□□□□□ -0.38
LPCAT3-210ENST00000540090 SLPIP03973 132 aa12.65□□□□□ -0.38
LPCAT3-210ENST00000540090 TCEAL7Q9BRU2 100 aa12.65□□□□□ -0.38
LPCAT3-210ENST00000540090 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-210ENST00000540090 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 F5H697 171 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 CXCL1P09341 107 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 FHITP49789 147 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 REG3AQ06141 175 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 Q5BKY6 102 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
LPCAT3-210ENST00000540090 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 BORCS7-ASMTA0A0B4J1R7 106 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 SNAI2O43623 268 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 CHTF8P0CG12 524 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 IQCJQ1A5X6 159 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 SPACA4Q8TDM5 124 aa12.63□□□□□ -0.39
LPCAT3-210ENST00000540090 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 P01737 135 aa12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 KIF25-AS1Q9Y6Z4 181 aa12.62□□□□□ -0.39
LPCAT3-210ENST00000540090 OR5AL1P0C617 328 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 AKR1C3P42330 323 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 CST9LP1Q5W188 147 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 DPH3P1Q9H4G8 78 aa12.61□□□□□ -0.39
LPCAT3-210ENST00000540090 IGHV1-24A0A0C4DH33 117 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 MUC21A0A140T8X8 626 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 PHOX2AO14813 284 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
LPCAT3-210ENST00000540090 GZMBP10144 247 aa12.59□□□□□ -0.39
LPCAT3-210ENST00000540090 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
LPCAT3-210ENST00000540090 A0A1B0GUV1 79 aa12.58□□□□□ -0.4
LPCAT3-210ENST00000540090 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
LPCAT3-210ENST00000540090 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
LPCAT3-210ENST00000540090 MED28Q9H204 178 aa12.58□□□□□ -0.4
LPCAT3-210ENST00000540090 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
LPCAT3-210ENST00000540090 SSTP61278 116 aa12.57□□□□□ -0.4
LPCAT3-210ENST00000540090 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
LPCAT3-210ENST00000540090 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
LPCAT3-210ENST00000540090 M0QY20 66 aa12.56□□□□□ -0.4
LPCAT3-210ENST00000540090 GFRA4Q9GZZ7 299 aa12.56□□□□□ -0.4
LPCAT3-210ENST00000540090 GIPP09681 153 aaPredicted RBP12.55□□□□□ -0.4
LPCAT3-210ENST00000540090 RAB5CP51148 216 aa12.55□□□□□ -0.4
LPCAT3-210ENST00000540090 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
LPCAT3-210ENST00000540090 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
LPCAT3-210ENST00000540090 PAGE4O60829 102 aa12.54□□□□□ -0.4
LPCAT3-210ENST00000540090 TMEM243Q9BU79 118 aa12.54□□□□□ -0.4
LPCAT3-210ENST00000540090 FXYD6-FXYD2A0A087WZ82 144 aa12.53□□□□□ -0.4
LPCAT3-210ENST00000540090 COX6A2Q02221 97 aa12.53□□□□□ -0.4
LPCAT3-210ENST00000540090 ODF1Q14990 250 aa12.53□□□□□ -0.4
LPCAT3-210ENST00000540090 H7C1H1 209 aa12.52□□□□□ -0.41
LPCAT3-210ENST00000540090 GTSF1Q8WW33 167 aa12.52□□□□□ -0.41
LPCAT3-210ENST00000540090 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 RPS10P46783 165 aaKnown RBP12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 PRR3P79522 188 aaKnown RBP12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 C15orf56Q8N910 161 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
LPCAT3-210ENST00000540090 NDUFS6O75380 124 aaKnown RBP12.5□□□□□ -0.41
LPCAT3-210ENST00000540090 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-210ENST00000540090 MAJINQ3KP22 176 aa12.5□□□□□ -0.41
LPCAT3-210ENST00000540090 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
LPCAT3-210ENST00000540090 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
LPCAT3-210ENST00000540090 MGPP08493 103 aa12.49□□□□□ -0.41
LPCAT3-210ENST00000540090 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
LPCAT3-210ENST00000540090 TMUB2Q71RG4 321 aa12.48□□□□□ -0.41
LPCAT3-210ENST00000540090 IGKV2-24A0A0C4DH68 120 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 IGLC6P0CF74 106 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 SULT1A2P50226 295 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 STPG4Q8N801 248 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
LPCAT3-210ENST00000540090 UBE2L6O14933 153 aa12.46□□□□□ -0.41
LPCAT3-210ENST00000540090 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.41
LPCAT3-210ENST00000540090 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
LPCAT3-210ENST00000540090 PFDN1O60925 122 aa12.45□□□□□ -0.42
LPCAT3-210ENST00000540090 FER1L6-AS1Q8NA97 138 aa12.45□□□□□ -0.42
LPCAT3-210ENST00000540090 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms