RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TEX46H3BTG2 121 aa14.65□□□□□ -0.06
SCARB1-206ENST00000539320 FAM30AQ9NZY2 134 aa14.65□□□□□ -0.06
SCARB1-206ENST00000539320 F5H697 171 aa14.64□□□□□ -0.07
SCARB1-206ENST00000539320 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-206ENST00000539320 RBFOX3A6NFN3 312 aa14.63□□□□□ -0.07
SCARB1-206ENST00000539320 FAM229AH3BQW9 127 aa14.63□□□□□ -0.07
SCARB1-206ENST00000539320 SMIM17P0DL12 118 aa14.63□□□□□ -0.07
SCARB1-206ENST00000539320 SULT1A2P50226 295 aa14.63□□□□□ -0.07
SCARB1-206ENST00000539320 SSTP61278 116 aa14.63□□□□□ -0.07
SCARB1-206ENST00000539320 TMEM262E9PQX1 116 aa14.62□□□□□ -0.07
SCARB1-206ENST00000539320 Q0VG73 95 aa14.62□□□□□ -0.07
SCARB1-206ENST00000539320 ATRAIDQ6UW56 229 aa14.62□□□□□ -0.07
SCARB1-206ENST00000539320 IFNA1P01562 189 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 IGLV2-8P01709 118 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 RPS20P60866 119 aaKnown RBP14.61□□□□□ -0.07
SCARB1-206ENST00000539320 Q6ZSA8 131 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 Q8N976 141 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 OR2D3Q8NGH3 330 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 DAZAP1Q96EP5 407 aaKnown RBP14.61□□□□□ -0.07
SCARB1-206ENST00000539320 SMIM12Q96EX1 92 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 TPPP3Q9BW30 176 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 KIF25-AS1Q9Y6Z4 181 aa14.61□□□□□ -0.07
SCARB1-206ENST00000539320 CRPP02741 224 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 IGLC6P0CF74 106 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 GZMBP10144 247 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 GNG4P50150 75 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 PKIAP61925 76 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 MEF2BQ02080 365 aaPredicted RBP14.6□□□□□ -0.07
SCARB1-206ENST00000539320 MPV17L2Q567V2 206 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 FER1L6-AS1Q8NA97 138 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 MYCBP2O75592 4640 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 HERC1Q15751 4861 aa14.6□□□□□ -0.07
SCARB1-206ENST00000539320 C19orf71A6NCJ1 209 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 PDE6DO43924 150 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 TMEM97Q5BJF2 176 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 ALKAL2Q6UX46 152 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 C15orf54Q8N8G6 183 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 CHCHD5Q9BSY4 110 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 C1orf43Q9BWL3 253 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 VAX2Q9UIW0 290 aa14.59□□□□□ -0.07
SCARB1-206ENST00000539320 RAB19A4D1S5 217 aa14.58□□□□□ -0.08
SCARB1-206ENST00000539320 MGPP08493 103 aa14.58□□□□□ -0.08
SCARB1-206ENST00000539320 BCL2P10415 239 aa14.58□□□□□ -0.08
SCARB1-206ENST00000539320 CACNG7P62955 275 aa14.57□□□□□ -0.08
SCARB1-206ENST00000539320 XKRY2A2RUG3 117 aa14.56□□□□□ -0.08
SCARB1-206ENST00000539320 P01737 135 aa14.56□□□□□ -0.08
SCARB1-206ENST00000539320 ANGP03950 147 aaKnown RBP14.56□□□□□ -0.08
SCARB1-206ENST00000539320 ENHOQ6UWT2 76 aa14.56□□□□□ -0.08
SCARB1-206ENST00000539320 MED9Q9NWA0 146 aa14.56□□□□□ -0.08
SCARB1-206ENST00000539320 TRBV20OR9-2A0A075B6H5 130 aa14.55□□□□□ -0.08
SCARB1-206ENST00000539320 LINC01620Q4KN68 170 aa14.55□□□□□ -0.08
SCARB1-206ENST00000539320 NTM-AS1Q6ZSK4 140 aa14.55□□□□□ -0.08
SCARB1-206ENST00000539320 BIN3Q9NQY0 253 aa14.55□□□□□ -0.08
SCARB1-206ENST00000539320 H7C1H1 209 aa14.54□□□□□ -0.08
SCARB1-206ENST00000539320 C14orf177Q52M58 125 aa14.54□□□□□ -0.08
SCARB1-206ENST00000539320 TRBV25-1A0A075B6N4 114 aa14.53□□□□□ -0.08
SCARB1-206ENST00000539320 M0QY20 66 aa14.53□□□□□ -0.08
SCARB1-206ENST00000539320 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
SCARB1-206ENST00000539320 TEX261Q6UWH6 196 aa14.53□□□□□ -0.08
SCARB1-206ENST00000539320 F2Z2F3 143 aa14.52□□□□□ -0.09
SCARB1-206ENST00000539320 TRGC1P0CF51 173 aa14.52□□□□□ -0.09
SCARB1-206ENST00000539320 TAGLN2P37802 199 aaKnown RBP14.52□□□□□ -0.09
SCARB1-206ENST00000539320 IFITM2Q01629 132 aa14.52□□□□□ -0.09
SCARB1-206ENST00000539320 GAGE6Q13070 117 aa14.52□□□□□ -0.09
SCARB1-206ENST00000539320 MIAQ16674 131 aa14.52□□□□□ -0.09
SCARB1-206ENST00000539320 SRRM2Q9UQ35 2752 aaKnown RBP14.52□□□□□ -0.09
SCARB1-206ENST00000539320 RBX1P62877 108 aa14.51□□□□□ -0.09
SCARB1-206ENST00000539320 IQCJQ1A5X6 159 aa14.51□□□□□ -0.09
SCARB1-206ENST00000539320 LINC00528Q8N1L1 170 aa14.51□□□□□ -0.09
SCARB1-206ENST00000539320 IGHV1-24A0A0C4DH33 117 aa14.5□□□□□ -0.09
SCARB1-206ENST00000539320 HLA-DQA1P01909 254 aa14.5□□□□□ -0.09
SCARB1-206ENST00000539320 LYZL1Q6UWQ5 148 aa14.5□□□□□ -0.09
SCARB1-206ENST00000539320 SCXQ7RTU7 201 aa14.5□□□□□ -0.09
SCARB1-206ENST00000539320 PLA2G1BP04054 148 aaKnown RBP14.49□□□□□ -0.09
SCARB1-206ENST00000539320 CTRLP40313 264 aa14.49□□□□□ -0.09
SCARB1-206ENST00000539320 CLPSL2Q6UWE3 100 aa14.49□□□□□ -0.09
SCARB1-206ENST00000539320 DPH3P1Q9H4G8 78 aa14.49□□□□□ -0.09
SCARB1-206ENST00000539320 PRR34Q9NV39 138 aa14.49□□□□□ -0.09
SCARB1-206ENST00000539320 RASL11AQ6T310 242 aa14.48□□□□□ -0.09
SCARB1-206ENST00000539320 USP17L23D6RBM5 183 aa14.47□□□□□ -0.09
SCARB1-206ENST00000539320 NUDT10Q8NFP7 164 aa14.47□□□□□ -0.09
SCARB1-206ENST00000539320 NUDT11Q96G61 164 aa14.47□□□□□ -0.09
SCARB1-206ENST00000539320 LINC00269Q8N2A0 174 aa14.46□□□□□ -0.09
SCARB1-206ENST00000539320 CHAC1Q9BUX1 264 aa14.46□□□□□ -0.09
SCARB1-206ENST00000539320 RPP21Q9H633 154 aaKnown RBP14.46□□□□□ -0.09
SCARB1-206ENST00000539320 NTF3P20783 257 aa14.45□□□□□ -0.1
SCARB1-206ENST00000539320 WDR73Q6P4I2 378 aa14.45□□□□□ -0.1
SCARB1-206ENST00000539320 TMEM243Q9BU79 118 aa14.45□□□□□ -0.1
SCARB1-206ENST00000539320 CNFNQ9BYD5 112 aa14.44□□□□□ -0.1
SCARB1-206ENST00000539320 RNASE7Q9H1E1 156 aaKnown RBP14.44□□□□□ -0.1
SCARB1-206ENST00000539320 NIT2Q9NQR4 276 aa14.44□□□□□ -0.1
SCARB1-206ENST00000539320 K7EN84 100 aa14.43□□□□□ -0.1
SCARB1-206ENST00000539320 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
SCARB1-206ENST00000539320 REG3AQ06141 175 aa14.42□□□□□ -0.1
SCARB1-206ENST00000539320 TWIST1Q15672 202 aa14.42□□□□□ -0.1
SCARB1-206ENST00000539320 KRTAP26-1Q6PEX3 210 aa14.42□□□□□ -0.1
SCARB1-206ENST00000539320 OCC1Q8TAD7 63 aa14.42□□□□□ -0.1
SCARB1-206ENST00000539320 C20orf203Q8NBC4 194 aa14.41□□□□□ -0.1
SCARB1-206ENST00000539320 CIRBP-AS1Q8TBR5 109 aa14.41□□□□□ -0.1
SCARB1-206ENST00000539320 TMEM250H0YL14 139 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms