RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MT-ND6P03923 174 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 GAGE1Q13065 139 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 GAGE4Q13068 117 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 GAGE5Q13069 117 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 GAGE13Q4V321 117 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 MRPL18Q9H0U6 180 aaKnown RBP16.37■□□□□ 0.21
TMEM260-202ENST00000538838 KLK5Q9Y337 293 aaPredicted RBP16.37■□□□□ 0.21
TMEM260-202ENST00000538838 NUDT3O95989 172 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 APCSP02743 223 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 CKS2P33552 79 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 RPS10P46783 165 aaKnown RBP16.37■□□□□ 0.21
TMEM260-202ENST00000538838 FRZBQ92765 325 aa16.37■□□□□ 0.21
TMEM260-202ENST00000538838 KIAA1644Q3SXP7 199 aa16.36■□□□□ 0.21
TMEM260-202ENST00000538838 ICOSQ9Y6W8 199 aa16.36■□□□□ 0.21
TMEM260-202ENST00000538838 A0A096LPF7 62 aa16.35■□□□□ 0.21
TMEM260-202ENST00000538838 ZNRF2Q8NHG8 242 aa16.35■□□□□ 0.21
TMEM260-202ENST00000538838 TRAPPC1Q9Y5R8 145 aa16.35■□□□□ 0.21
TMEM260-202ENST00000538838 TENM2Q9NT68 2774 aa16.35■□□□□ 0.21
TMEM260-202ENST00000538838 LINC00694P0DN24 101 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 OR10J3Q5JRS4 329 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 NIT2Q9NQR4 276 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 RPL36AP83881 106 aaKnown RBP16.34■□□□□ 0.21
TMEM260-202ENST00000538838 FABP9Q0Z7S8 132 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 ORMDL3Q8N138 153 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 NRACQ8N912 160 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 C15orf53Q8NAA6 179 aa16.34■□□□□ 0.21
TMEM260-202ENST00000538838 RPL36ALQ969Q0 106 aaKnown RBP16.34■□□□□ 0.21
TMEM260-202ENST00000538838 TRBV7-3A0A075B6L6 115 aa16.33■□□□□ 0.2
TMEM260-202ENST00000538838 RAB5AP20339 215 aa16.33■□□□□ 0.2
TMEM260-202ENST00000538838 SRIP30626 198 aa16.33■□□□□ 0.2
TMEM260-202ENST00000538838 TNFRSF18Q9Y5U5 241 aa16.33■□□□□ 0.2
TMEM260-202ENST00000538838 PPBPP02775 128 aa16.32■□□□□ 0.2
TMEM260-202ENST00000538838 MRPL23Q16540 153 aaKnown RBP16.32■□□□□ 0.2
TMEM260-202ENST00000538838 NPYP01303 97 aa16.31■□□□□ 0.2
TMEM260-202ENST00000538838 DNAJC30Q96LL9 226 aa16.31■□□□□ 0.2
TMEM260-202ENST00000538838 PRELID3AQ96N28 172 aa16.31■□□□□ 0.2
TMEM260-202ENST00000538838 APLNQ9ULZ1 77 aa16.31■□□□□ 0.2
TMEM260-202ENST00000538838 C3orf84H3BNL1 204 aa16.3■□□□□ 0.2
TMEM260-202ENST00000538838 UBE2D3P61077 147 aa16.3■□□□□ 0.2
TMEM260-202ENST00000538838 UBE2D2P62837 147 aa16.3■□□□□ 0.2
TMEM260-202ENST00000538838 CASC10Q5T4H9 136 aa16.3■□□□□ 0.2
TMEM260-202ENST00000538838 TNFRSF6BO95407 300 aa16.3■□□□□ 0.2
TMEM260-202ENST00000538838 TRBV6-5A0A0K0K1A5 114 aa16.29■□□□□ 0.2
TMEM260-202ENST00000538838 PLECQ15149 4684 aaKnown RBP16.29■□□□□ 0.2
TMEM260-202ENST00000538838 IGHV3-38A0A0C4DH36 116 aa16.28■□□□□ 0.2
TMEM260-202ENST00000538838 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-202ENST00000538838 ATP6V0E2Q8NHE4 81 aa16.28■□□□□ 0.2
TMEM260-202ENST00000538838 ST20Q9HBF5 79 aa16.28■□□□□ 0.2
TMEM260-202ENST00000538838 PPP1R17O96001 155 aa16.27■□□□□ 0.2
TMEM260-202ENST00000538838 NEGR1Q7Z3B1 354 aa16.27■□□□□ 0.2
TMEM260-202ENST00000538838 SDHAF1A6NFY7 115 aa16.27■□□□□ 0.19
TMEM260-202ENST00000538838 TRGC2P03986 189 aa16.26■□□□□ 0.19
TMEM260-202ENST00000538838 TCTAP57738 103 aa16.26■□□□□ 0.19
TMEM260-202ENST00000538838 SUMO2P61956 95 aaKnown RBP16.26■□□□□ 0.19
TMEM260-202ENST00000538838 ALKBH7Q9BT30 221 aaPredicted RBP16.26■□□□□ 0.19
TMEM260-202ENST00000538838 TMEM70Q9BUB7 260 aa16.26■□□□□ 0.19
TMEM260-202ENST00000538838 PHOX2AO14813 284 aa16.25■□□□□ 0.19
TMEM260-202ENST00000538838 SH2D6Q7Z4S9 175 aa16.25■□□□□ 0.19
TMEM260-202ENST00000538838 DEFB104AQ8WTQ1 72 aa16.25■□□□□ 0.19
TMEM260-202ENST00000538838 LAMTOR2Q9Y2Q5 125 aa16.25■□□□□ 0.19
TMEM260-202ENST00000538838 DAZ4Q86SG3 579 aaKnown RBP16.23■□□□□ 0.19
TMEM260-202ENST00000538838 C20orf78Q9BR46 151 aa16.23■□□□□ 0.19
TMEM260-202ENST00000538838 DAZ3Q9NR90 486 aaKnown RBP16.23■□□□□ 0.19
TMEM260-202ENST00000538838 POLR2KP53803 58 aaKnown RBP16.23■□□□□ 0.19
TMEM260-202ENST00000538838 ESRGQ1W209 222 aa16.22■□□□□ 0.19
TMEM260-202ENST00000538838 LYPD5Q6UWN5 251 aa16.22■□□□□ 0.19
TMEM260-202ENST00000538838 GTSF1LQ9H1H1 148 aa16.22■□□□□ 0.19
TMEM260-202ENST00000538838 SMIM2Q9BVW6 85 aa16.21■□□□□ 0.19
TMEM260-202ENST00000538838 MAP1LC3AQ9H492 121 aa16.21■□□□□ 0.19
TMEM260-202ENST00000538838 LOC389332A0A1B0GUA5 103 aa16.2■□□□□ 0.18
TMEM260-202ENST00000538838 TRBV27A0A0K0K1C4 114 aa16.19■□□□□ 0.18
TMEM260-202ENST00000538838 I3L3M4 83 aa16.19■□□□□ 0.18
TMEM260-202ENST00000538838 PMCHP20382 165 aa16.19■□□□□ 0.18
TMEM260-202ENST00000538838 LYSTQ99698 3801 aa16.19■□□□□ 0.18
TMEM260-202ENST00000538838 RPL32P62910 135 aaKnown RBP16.18■□□□□ 0.18
TMEM260-202ENST00000538838 IQCJQ1A5X6 159 aa16.18■□□□□ 0.18
TMEM260-202ENST00000538838 NTM-AS1Q6ZSK4 140 aa16.18■□□□□ 0.18
TMEM260-202ENST00000538838 PRSS47A8MTI9 375 aa16.17■□□□□ 0.18
TMEM260-202ENST00000538838 VCYO14598 125 aa16.17■□□□□ 0.18
TMEM260-202ENST00000538838 COTL1Q14019 142 aa16.17■□□□□ 0.18
TMEM260-202ENST00000538838 LINC00588Q9Y4M8 146 aa16.17■□□□□ 0.18
TMEM260-202ENST00000538838 TSHBP01222 138 aa16.16■□□□□ 0.18
TMEM260-202ENST00000538838 CCL18P55774 89 aa16.16■□□□□ 0.18
TMEM260-202ENST00000538838 TIRAPP58753 221 aa16.16■□□□□ 0.18
TMEM260-202ENST00000538838 C18orf32Q8TCD1 76 aa16.16■□□□□ 0.18
TMEM260-202ENST00000538838 IGLV2-18A0A075B6J9 118 aa16.16■□□□□ 0.18
TMEM260-202ENST00000538838 TRBV6-8A0A0A6YYG3 113 aa16.14■□□□□ 0.17
TMEM260-202ENST00000538838 IFI27P40305 119 aaPredicted RBP16.14■□□□□ 0.17
TMEM260-202ENST00000538838 LELP1Q5T871 98 aa16.14■□□□□ 0.17
TMEM260-202ENST00000538838 UBE2DNLQ8IWF7 75 aa16.14■□□□□ 0.17
TMEM260-202ENST00000538838 KIR2DL4Q99706 377 aa16.14■□□□□ 0.17
TMEM260-202ENST00000538838 TCAPO15273 167 aa16.13■□□□□ 0.17
TMEM260-202ENST00000538838 TMEM97Q5BJF2 176 aa16.13■□□□□ 0.17
TMEM260-202ENST00000538838 Q8N8P6 123 aa16.13■□□□□ 0.17
TMEM260-202ENST00000538838 MRPS16Q9Y3D3 137 aaKnown RBP16.13■□□□□ 0.17
TMEM260-202ENST00000538838 FCER1GP30273 86 aa16.12■□□□□ 0.17
TMEM260-202ENST00000538838 AMTP48728 403 aa16.12■□□□□ 0.17
TMEM260-202ENST00000538838 NXT2Q9NPJ8 142 aaKnown RBP16.12■□□□□ 0.17
TMEM260-202ENST00000538838 TRBV25-1A0A075B6N4 114 aa16.11■□□□□ 0.17
TMEM260-202ENST00000538838 IGHV1-24A0A0C4DH33 117 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms