RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 FABP4P15090 132 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
CLN6-202ENST00000538696 AKR1D1P51857 326 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 PMCHP20382 165 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 DAD1P61803 113 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 LGALS9BQ3B8N2 356 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
CLN6-202ENST00000538696 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
CLN6-202ENST00000538696 HSBP1O75506 76 aa12.18□□□□□ -0.46
CLN6-202ENST00000538696 LINC00614P0C842 121 aa12.18□□□□□ -0.46
CLN6-202ENST00000538696 Q6ZTC4 211 aa12.18□□□□□ -0.46
CLN6-202ENST00000538696 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
CLN6-202ENST00000538696 RHODO00212 210 aa12.17□□□□□ -0.46
CLN6-202ENST00000538696 Q6ZSN1 163 aa12.17□□□□□ -0.46
CLN6-202ENST00000538696 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
CLN6-202ENST00000538696 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
CLN6-202ENST00000538696 IGLV2-18A0A075B6J9 118 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 M0QY20 66 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 AMTP48728 403 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 OR4C5Q8NGB2 326 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 PACRGQ96M98 296 aaPredicted RBP12.16□□□□□ -0.46
CLN6-202ENST00000538696 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 DNAH7Q8WXX0 4024 aa12.16□□□□□ -0.46
CLN6-202ENST00000538696 TRAV4A0A0B4J268 109 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 SUMO2P61956 95 aaKnown RBP12.15□□□□□ -0.46
CLN6-202ENST00000538696 Q8N8P6 123 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 WWC2-AS2Q96NR7 200 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 SMIM2Q9BVW6 85 aa12.15□□□□□ -0.46
CLN6-202ENST00000538696 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 PPP1R17O96001 155 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 ZNF479Q96JC4 524 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
CLN6-202ENST00000538696 AP5S1Q9NUS5 200 aa12.14□□□□□ -0.47
CLN6-202ENST00000538696 LINC01546A6NGU7 62 aa12.13□□□□□ -0.47
CLN6-202ENST00000538696 P0DMU3 169 aa12.13□□□□□ -0.47
CLN6-202ENST00000538696 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
CLN6-202ENST00000538696 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
CLN6-202ENST00000538696 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
CLN6-202ENST00000538696 TRBV6-5A0A0K0K1A5 114 aa12.12□□□□□ -0.47
CLN6-202ENST00000538696 ATP5G1P05496 136 aa12.12□□□□□ -0.47
CLN6-202ENST00000538696 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
CLN6-202ENST00000538696 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 H7C1H1 209 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 HTN3P15516 51 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 A0A096LNJ9 63 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 TCAPO15273 167 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 POLR2KP53803 58 aaKnown RBP12.11□□□□□ -0.47
CLN6-202ENST00000538696 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
CLN6-202ENST00000538696 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
CLN6-202ENST00000538696 TMEM70Q9BUB7 260 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 Q9UF83 564 aa12.11□□□□□ -0.47
CLN6-202ENST00000538696 DEFB131BA0A096LNP1 70 aa12.1□□□□□ -0.47
CLN6-202ENST00000538696 MUC7Q8TAX7 377 aa12.1□□□□□ -0.47
CLN6-202ENST00000538696 STARD9Q9P2P6 4700 aa12.09□□□□□ -0.47
CLN6-202ENST00000538696 SDHAF1A6NFY7 115 aa12.09□□□□□ -0.47
CLN6-202ENST00000538696 LINC00173Q6ZV60 143 aa12.09□□□□□ -0.47
CLN6-202ENST00000538696 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
CLN6-202ENST00000538696 F5H768 121 aa12.08□□□□□ -0.48
CLN6-202ENST00000538696 FHL2Q14192 279 aa12.08□□□□□ -0.48
CLN6-202ENST00000538696 DYNC2H1Q8NCM8 4307 aaKnown RBP12.07□□□□□ -0.48
CLN6-202ENST00000538696 K7EQD1 137 aa12.07□□□□□ -0.48
CLN6-202ENST00000538696 HBDP02042 147 aa12.07□□□□□ -0.48
CLN6-202ENST00000538696 LAGE3Q14657 143 aa12.07□□□□□ -0.48
CLN6-202ENST00000538696 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
CLN6-202ENST00000538696 DEFB104AQ8WTQ1 72 aa12.07□□□□□ -0.48
CLN6-202ENST00000538696 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
CLN6-202ENST00000538696 VCYO14598 125 aa12.06□□□□□ -0.48
CLN6-202ENST00000538696 FCER1GP30273 86 aa12.06□□□□□ -0.48
CLN6-202ENST00000538696 PYY3Q5JQD4 70 aa12.06□□□□□ -0.48
CLN6-202ENST00000538696 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
CLN6-202ENST00000538696 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 NUPR2A6NF83 97 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 CIDEAO60543 219 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 KRTDAPP60985 99 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
CLN6-202ENST00000538696 C3orf79P0CE67 100 aa12.04□□□□□ -0.48
CLN6-202ENST00000538696 NUDT3O95989 172 aa12.03□□□□□ -0.48
CLN6-202ENST00000538696 TSHBP01222 138 aa12.03□□□□□ -0.48
CLN6-202ENST00000538696 SMIM6P0DI80 62 aa12.03□□□□□ -0.48
CLN6-202ENST00000538696 CRYBA4P53673 196 aa12.03□□□□□ -0.48
CLN6-202ENST00000538696 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
CLN6-202ENST00000538696 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
CLN6-202ENST00000538696 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms