RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 TRAPPC1Q9Y5R8 145 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 H3BTX0 84 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 MT-ND6P03923 174 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 SNRPCP09234 159 aaKnown RBP5.97□□□□□ -1.45
USP28-205ENST00000537706 CMTM2Q8TAZ6 248 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 MLST8Q9BVC4 326 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 GATCO43716 136 aaKnown RBP5.96□□□□□ -1.46
USP28-205ENST00000537706 IGHV3-30P01768 117 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 IGHV3-33P01772 117 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 IGHV3-30-3P0DP02 117 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 IGHV3-30-5P0DP03 117 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
USP28-205ENST00000537706 LEPP41159 167 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 TIRAPP58753 221 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 CT83Q5H943 113 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 OR10J3Q5JRS4 329 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 WDR73Q6P4I2 378 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 TMEM75Q8N9X5 138 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
USP28-205ENST00000537706 TRAV8-2A0A0B4J237 113 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 K7EQM0 130 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 ZNF253O75346 499 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 RASL11AQ6T310 242 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 EXOC3-AS1Q8N2X6 119 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 TRAV8-1A0A0A6YYK1 113 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 SERTM2A0A1B0GWG4 89 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 SPINK4O60575 86 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 FHL2Q14192 279 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
USP28-205ENST00000537706 PRR27Q6MZM9 219 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 ARL6IP6Q8N6S5 226 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 TSKUQ8WUA8 353 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 NUDT11Q96G61 164 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 HIST1H2BLQ99880 126 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 MRPL18Q9H0U6 180 aaKnown RBP5.95□□□□□ -1.46
USP28-205ENST00000537706 RPP21Q9H633 154 aaKnown RBP5.95□□□□□ -1.46
USP28-205ENST00000537706 AAMDCQ9H7C9 122 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 NAT8BQ9UHF3 227 aa5.95□□□□□ -1.46
USP28-205ENST00000537706 C19orf71A6NCJ1 209 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 HLA-DQA1P01909 254 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 FABP4P15090 132 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 TCL1AP56279 114 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 PDZD11Q5EBL8 140 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
USP28-205ENST00000537706 PACRGQ96M98 296 aaPredicted RBP5.94□□□□□ -1.46
USP28-205ENST00000537706 A0A087X0K7 114 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 FBLL1A6NHQ2 334 aaKnown RBP5.93□□□□□ -1.46
USP28-205ENST00000537706 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 J3KRW8 73 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 P01737 135 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 S100A12P80511 92 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 TMEM136Q6ZRR5 245 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 ATP5L2Q7Z4Y8 100 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 OR10D4PQ8NGN7 298 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 SGK494Q96LW2 274 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 ZFP30Q9Y2G7 519 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 FAM231BA6NCW3 169 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 CSN1S1P47710 185 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 ANXA2RQ3ZCQ2 193 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 PYY3Q5JQD4 70 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 PRNTQ86SH4 94 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 GFRA4Q9GZZ7 299 aa5.93□□□□□ -1.46
USP28-205ENST00000537706 HIGD1CA8MV81 97 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 A8MWL6 223 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 MRPL54Q6P161 138 aaKnown RBP5.92□□□□□ -1.46
USP28-205ENST00000537706 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 NUP35Q8NFH5 326 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 TMEM18Q96B42 140 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 NIT2Q9NQR4 276 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 MRPL16Q9NX20 251 aaKnown RBP5.92□□□□□ -1.46
USP28-205ENST00000537706 PSG8Q9UQ74 426 aa5.92□□□□□ -1.46
USP28-205ENST00000537706 A0A1B0GXF2 115 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 M0R3E3 92 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 ESDP10768 282 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 CRISP2P16562 243 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 SLC50A1Q9BRV3 221 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 ZNF331Q9NQX6 463 aaPredicted RBP5.91□□□□□ -1.46
USP28-205ENST00000537706 PCP4L1A6NKN8 68 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 RAB4BP61018 213 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 Q0VG73 95 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 COX8CQ7Z4L0 72 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 ZC2HC1AQ96GY0 325 aa5.91□□□□□ -1.46
USP28-205ENST00000537706 GRIFINA4D1Z8 144 aa5.9□□□□□ -1.46
USP28-205ENST00000537706 APCSP02743 223 aa5.9□□□□□ -1.46
USP28-205ENST00000537706 CT45A10P0DMU9 189 aa5.9□□□□□ -1.46
USP28-205ENST00000537706 ODF3Q96PU9 254 aa5.9□□□□□ -1.46
USP28-205ENST00000537706 TP53TG3Q9ULZ0 132 aa5.9□□□□□ -1.46
USP28-205ENST00000537706 PANO1I0J062 215 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 LINC00310P59036 64 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
USP28-205ENST00000537706 HBBP68871 147 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms