RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
PRKDC-206ENST00000536429 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
PRKDC-206ENST00000536429 A0A087WWC5 75 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 F2Z2F3 143 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 NTF3P20783 257 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
PRKDC-206ENST00000536429 SUMO4Q6EEV6 95 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 NIT1Q86X76 327 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 DNAJC30Q96LL9 226 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
PRKDC-206ENST00000536429 M0QY20 66 aa8.8□□□□□ -1
PRKDC-206ENST00000536429 ERVFC1-1P60608 527 aa8.8□□□□□ -1
PRKDC-206ENST00000536429 LINC01551Q86U37 167 aa8.8□□□□□ -1
PRKDC-206ENST00000536429 CNFNQ9BYD5 112 aa8.8□□□□□ -1
PRKDC-206ENST00000536429 FAT1Q14517 4588 aa8.8□□□□□ -1
PRKDC-206ENST00000536429 GATCO43716 136 aaKnown RBP8.79□□□□□ -1
PRKDC-206ENST00000536429 NDUFS6O75380 124 aaKnown RBP8.79□□□□□ -1
PRKDC-206ENST00000536429 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
PRKDC-206ENST00000536429 TWIST1Q15672 202 aa8.79□□□□□ -1
PRKDC-206ENST00000536429 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
PRKDC-206ENST00000536429 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
PRKDC-206ENST00000536429 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 ZNF727A8MUV8 499 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 WDR73Q6P4I2 378 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
PRKDC-206ENST00000536429 TRGC1P0CF51 173 aa8.77□□□□□ -1.01
PRKDC-206ENST00000536429 WFDC2Q14508 124 aa8.77□□□□□ -1.01
PRKDC-206ENST00000536429 LAGE3Q14657 143 aa8.77□□□□□ -1.01
PRKDC-206ENST00000536429 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1.01
PRKDC-206ENST00000536429 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
PRKDC-206ENST00000536429 PSCAO43653 123 aa8.76□□□□□ -1.01
PRKDC-206ENST00000536429 DEFB104AQ8WTQ1 72 aa8.76□□□□□ -1.01
PRKDC-206ENST00000536429 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
PRKDC-206ENST00000536429 A8MWL6 223 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 TMEM262E9PQX1 116 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 EREGO14944 169 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 MPV17L2Q567V2 206 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 CT83Q5H943 113 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 MAPKAPK5-AS1Q8N8E1 139 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 URGCP-MRPS24S4R325 110 aa8.75□□□□□ -1.01
PRKDC-206ENST00000536429 A0A087WX48 190 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 RPL23P62829 140 aaKnown RBP8.74□□□□□ -1.01
PRKDC-206ENST00000536429 GATD1Q8NB37 220 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 ISOC2Q96AB3 205 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 UBE2WQ96B02 151 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 V9GYV3 84 aa8.74□□□□□ -1.01
PRKDC-206ENST00000536429 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 HIGD1CA8MV81 97 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 H7C1H1 209 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 LECT2O14960 151 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 GAGE6Q13070 117 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 Q8N976 141 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 TSKUQ8WUA8 353 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
PRKDC-206ENST00000536429 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 PEA15Q15121 130 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 ADIRFQ15847 76 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 FAM74A3Q4VXF1 159 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 ATRAIDQ6UW56 229 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 ENHOQ6UWT2 76 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 Q8N814 137 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 C15orf54Q8N8G6 183 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.72□□□□□ -1.01
PRKDC-206ENST00000536429 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
PRKDC-206ENST00000536429 TM2D2Q9BX73 214 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
PRKDC-206ENST00000536429 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 IQCJQ1A5X6 159 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 CDPF1Q6NVV7 123 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 KCNIP4Q6PIL6 250 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 BAALCQ8WXS3 180 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 NAT8Q9UHE5 227 aa8.71□□□□□ -1.02
PRKDC-206ENST00000536429 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 IGHV1-24A0A0C4DH33 117 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 RBX1P62877 108 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 TMEM97Q5BJF2 176 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 NUP35Q8NFH5 326 aa8.7□□□□□ -1.02
PRKDC-206ENST00000536429 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 A0A1B0GUT8 65 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 ANGP03950 147 aaKnown RBP8.69□□□□□ -1.02
PRKDC-206ENST00000536429 ELOBQ15370 118 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 CLPSL2Q6UWE3 100 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 SMIM15Q7Z3B0 74 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 SMDT1Q9H4I9 107 aa8.69□□□□□ -1.02
PRKDC-206ENST00000536429 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
PRKDC-206ENST00000536429 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
PRKDC-206ENST00000536429 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms