RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZNF818PQ6ZRF7 136 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 HEATR1Q9H583 2144 aaKnown RBP0.99□□□□□ -2.25
VBP1-203ENST00000535916 LRRC37A3O60309 1634 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 ARHGAP5Q13017 1502 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 ABCC10Q5T3U5 1492 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 TRAV13-2A0A0B4J235 113 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 PIGBOS1A0A0B4J2F0 54 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 UBE2L5PA0A1B0GUS4 154 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 HCG22E2RYF7 251 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 SIX6O95475 246 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 UBE2L3P68036 154 aaKnown RBP0.98□□□□□ -2.25
VBP1-203ENST00000535916 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 Q6ZSA8 131 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 COMMD6Q7Z4G1 85 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 C20orf197Q8N268 126 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 SVBPQ8N300 66 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 MED13Q9UHV7 2174 aa0.98□□□□□ -2.25
VBP1-203ENST00000535916 SIPA1L3O60292 1781 aaPredicted RBP0.98□□□□□ -2.25
VBP1-203ENST00000535916 TNS1Q9HBL0 1735 aaKnown RBP0.98□□□□□ -2.25
VBP1-203ENST00000535916 TOPAZ1Q8N9V7 1692 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 PHIPQ8WWQ0 1821 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 SSSCA1O60232 199 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
VBP1-203ENST00000535916 SPINK8P0C7L1 97 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
VBP1-203ENST00000535916 ZNF56Q15929 161 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 Q86TA4 180 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 C4orf33Q8N1A6 199 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 TTC9CQ8N5M4 171 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 ACBD7Q8N6N7 88 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 AQP10Q96PS8 301 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 DPH3P1Q9H4G8 78 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 MYH9P35579 1960 aaKnown RBP0.97□□□□□ -2.25
VBP1-203ENST00000535916 TET3O43151 1660 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 ZNF609O15014 1411 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 TET1Q8NFU7 2136 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 PLXNA1Q9UIW2 1896 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 CACNA1BQ00975 2339 aa0.97□□□□□ -2.25
VBP1-203ENST00000535916 PATJQ8NI35 1801 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 TRBV7-1A0A0A6YYK4 115 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 TRBV30A0A0K0K1B3 111 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 FAM24AA6NFZ4 105 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 FXYD1O00168 92 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
VBP1-203ENST00000535916 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
VBP1-203ENST00000535916 COX7B2Q8TF08 81 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 BET1LQ9NYM9 111 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 LINC00312Q9Y6C7 94 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 PPIP5K1Q6PFW1 1433 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 SCAPERQ9BY12 1400 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 AFDNP55196 1824 aaKnown RBP0.96□□□□□ -2.26
VBP1-203ENST00000535916 TTC37Q6PGP7 1564 aa0.96□□□□□ -2.26
VBP1-203ENST00000535916 ANKRD26Q9UPS8 1709 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.95□□□□□ -2.26
VBP1-203ENST00000535916 RBAKDNA6NC62 111 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 SSBP1Q04837 148 aaKnown RBP0.95□□□□□ -2.26
VBP1-203ENST00000535916 TMEM14BQ9NUH8 114 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 LINC00474Q9P2X8 69 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 CHD1O14646 1710 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 UNC13CQ8NB66 2214 aa0.95□□□□□ -2.26
VBP1-203ENST00000535916 DIDO1Q9BTC0 2240 aaKnown RBP0.95□□□□□ -2.26
VBP1-203ENST00000535916 SHANK2Q9UPX8 1470 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 MYO18AQ92614 2054 aaKnown RBP0.94□□□□□ -2.26
VBP1-203ENST00000535916 A0A1W2PPM0 123 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 K7EIL1 84 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
VBP1-203ENST00000535916 NCMAPQ5T1S8 102 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 PPP1R1CQ8WVI7 109 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 CYP4F30PQ9H0H9 118 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 TROQ12816 1431 aaPredicted RBP0.94□□□□□ -2.26
VBP1-203ENST00000535916 ABCA3Q99758 1704 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 DOCK1Q14185 1865 aa0.94□□□□□ -2.26
VBP1-203ENST00000535916 MAP2P11137 1827 aaKnown RBP0.94□□□□□ -2.26
VBP1-203ENST00000535916 AKAP12Q02952 1782 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 ABCC5O15440 1437 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 A0A096LNT2 108 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 H3BQ15 152 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 M0R143 59 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 MPC2O95563 127 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 EDDM3BP56851 147 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 S100A10P60903 97 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 Q8N6K4 173 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 MYOM1P52179 1685 aa0.93□□□□□ -2.26
VBP1-203ENST00000535916 GAPVD1Q14C86 1478 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 PRDM2Q13029 1718 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 ARHGEF5Q12774 1597 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 LY6G6CO95867 125 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 PKIAP61925 76 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 FAM74A4Q5TZK3 123 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 TSLPQ969D9 159 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 Q96NJ1 140 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 MRC1P22897 1456 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 PARP14Q460N5 1801 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
VBP1-203ENST00000535916 LAMC3Q9Y6N6 1575 aa0.91□□□□□ -2.26
VBP1-203ENST00000535916 INTS1Q8N201 2190 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms