RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 UBE2L6O14933 153 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 IFNA1P01562 189 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 TMUB2Q71RG4 321 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 OR10AG1Q8NH19 301 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 MBD3L1Q8WWY6 194 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 Q9UF83 564 aa8.71□□□□□ -1.02
CLSTN3-205ENST00000535452 BCL2L11O43521 198 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 CACNG7P62955 275 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 RPL19P84098 196 aaKnown RBP8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 LINC01620Q4KN68 170 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 MPV17L2Q567V2 206 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 NEXN-AS1Q8NBZ9 246 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 DPH3Q96FX2 82 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 CYTL1Q9NRR1 136 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
CLSTN3-205ENST00000535452 IGHV1-24A0A0C4DH33 117 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 HMSDA8MTL9 139 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 SNAI2O43623 268 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 TRGC1P0CF51 173 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 RAB5CP51148 216 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 GNG13Q9P2W3 67 aa8.69□□□□□ -1.02
CLSTN3-205ENST00000535452 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 MUC21A0A140T8X8 626 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 GNG4P50150 75 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 GAGE6Q13070 117 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 FER1L6-AS1Q8NA97 138 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 CLRN3Q8NCR9 226 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 OR2D3Q8NGH3 330 aa8.68□□□□□ -1.02
CLSTN3-205ENST00000535452 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 F2Z2F3 143 aa8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 P01737 135 aa8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 SMIM12Q96EX1 92 aa8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-205ENST00000535452 TRAV8-4A0A0B4J246 113 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 PDE6DO43924 150 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 RPL37AP61513 92 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 CLPSL2Q6UWE3 100 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 ENHOQ6UWT2 76 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
CLSTN3-205ENST00000535452 GZMBP10144 247 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 RBX1P62877 108 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 REG3AQ06141 175 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
CLSTN3-205ENST00000535452 FAT1Q14517 4588 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 OXTP01178 125 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 SULT1A2P50226 295 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
CLSTN3-205ENST00000535452 G3V3Q6 166 aa8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 TAGLN2P37802 199 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 CCL20P78556 96 aa8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 COTL1Q14019 142 aa8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 CFAP161Q6P656 301 aa8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-205ENST00000535452 IGLV10-54A0A075B6I4 117 aa8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 AMTP48728 403 aa8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 NKX2-5P52952 324 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 AMMECR1LQ6DCA0 310 aa8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 C11orf52Q96A22 123 aa8.62□□□□□ -1.03
CLSTN3-205ENST00000535452 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 TWIST1Q15672 202 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
CLSTN3-205ENST00000535452 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
CLSTN3-205ENST00000535452 TRAV1-1A0A0B4J248 108 aa8.6□□□□□ -1.03
CLSTN3-205ENST00000535452 M0QY20 66 aa8.6□□□□□ -1.03
CLSTN3-205ENST00000535452 PRSS1P07477 247 aa8.6□□□□□ -1.03
CLSTN3-205ENST00000535452 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
CLSTN3-205ENST00000535452 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
CLSTN3-205ENST00000535452 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
CLSTN3-205ENST00000535452 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
CLSTN3-205ENST00000535452 KIF25-AS1Q9Y6Z4 181 aa8.59□□□□□ -1.03
CLSTN3-205ENST00000535452 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
CLSTN3-205ENST00000535452 NTF3P20783 257 aa8.58□□□□□ -1.04
CLSTN3-205ENST00000535452 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
CLSTN3-205ENST00000535452 C7orf33Q8WU49 177 aa8.58□□□□□ -1.04
CLSTN3-205ENST00000535452 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms