RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	POLR2J	P52435	117 aa	Known RBP	0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	UBE2L3	P68036	154 aa	Known RBP	0.94	□□□□□ -2.26
PTK2-250	ENST00000523746		Q0VG73	95 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	INSL4	Q14641	139 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	LYPD5	Q6UWN5	251 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	SCP2D1	Q9UJQ7	156 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	AP4S1	Q9Y587	144 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	TNS1	Q9HBL0	1735 aa	Known RBP	0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	CNTRL	Q7Z7A1	2325 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	LAMA4	Q16363	1823 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	PATJ	Q8NI35	1801 aa		0.94	□□□□□ -2.26
PTK2-250	ENST00000523746	NIN	Q8N4C6	2090 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	MYO18A	Q92614	2054 aa	Known RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	CCDC18	Q5T9S5	1454 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	CHD1	O14646	1710 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	PEAK1	Q9H792	1746 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	ABCC5	O15440	1437 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	TRBV10-3	A0A0K0K1G6	114 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	TMEM30CP	A0ZSE6	113 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	RBAKDN	A6NC62	111 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	NUPR2	A6NF83	97 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746		H3BRM9	83 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	UBA52	P62987	128 aa	Known RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	CCL8	P80075	99 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	DEFB132	Q7Z7B7	95 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	C4orf33	Q8N1A6	199 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746		Q8N6K4	173 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	DMAC1	Q96GE9	116 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	MRPL35	Q9NZE8	188 aa	Known RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746		E9PCH4	1651 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	CTTNBP2	Q8WZ74	1663 aa		0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	PRDM15	P57071	1507 aa	Predicted RBP	0.93	□□□□□ -2.26
PTK2-250	ENST00000523746	DOCK1	Q14185	1865 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	NWD2	Q9ULI1	1742 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	MARF1	Q9Y4F3	1742 aa	Known RBP	0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	LAMC3	Q9Y6N6	1575 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	SCAPER	Q9BY12	1400 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	TET3	O43151	1660 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	PTPRD	P23468	1912 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	TRAV17	A0A0B4J275	112 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	MT-ATP8	P03928	68 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	CCK	P06307	115 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	IGLC1	P0CG04	106 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	PDE6G	P18545	87 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	UBE2G1	P62253	170 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	CSAG1	Q6PB30	78 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	UNQ5815/PRO19632	Q6UWF5	114 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	ZNF818P	Q6ZRF7	136 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	LCN9	Q8WX39	176 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	CYP4F30P	Q9H0H9	118 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	ATG5	Q9H1Y0	275 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	TMEM14C	Q9P0S9	112 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	MUC16	Q8WXI7	14507 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	SBF2	Q86WG5	1849 aa		0.92	□□□□□ -2.26
PTK2-250	ENST00000523746	MYH8	P13535	1937 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	ARHGEF12	Q9NZN5	1544 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	DCAF1	Q9Y4B6	1507 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	IGLV3-32	A0A0A0MS00	114 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	TRBV7-1	A0A0A6YYK4	115 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	TRAV13-2	A0A0B4J235	113 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	SIX6	O95475	246 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	DNAL4	O96015	105 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	IGLV3-1	P01715	115 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	IGKC	P01834	107 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	IL7	P13232	177 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	RBM3	P98179	157 aa	Known RBP	0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	PYY3	Q5JQD4	70 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	VAMP8	Q9BV40	100 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746		Q9H521	79 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	MRPL36	Q9P0J6	103 aa	Known RBP	0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	MED12	Q93074	2177 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	DLEC1	Q9Y238	1755 aa		0.91	□□□□□ -2.26
PTK2-250	ENST00000523746	TRAV23DV6	A0A075B6W5	121 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	TRAV12-3	A0A0B4J271	114 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746		A6NIN4	97 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	HCG22	E2RYF7	251 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	ASIP	P42127	132 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	UBE2D1	P51668	147 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	S100A7L2	Q5SY68	101 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	RPL7L1	Q6DKI1	246 aa	Known RBP	0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	KRTAP5-10	Q6L8G5	202 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	MYOZ3	Q8TDC0	251 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	C10orf82	Q8WW14	230 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	IFI27L1	Q96BM0	104 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	LIMD2	Q9BT23	127 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	KIAA0100	Q14667	2235 aa	Known RBP	0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	ANKRD36B	Q8N2N9	1353 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	MAGI2	Q86UL8	1455 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	SHANK2	Q9UPX8	1470 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	PLXNA1	Q9UIW2	1896 aa		0.9	□□□□□ -2.27
PTK2-250	ENST00000523746	BLM	P54132	1417 aa	Predicted RBP	0.89	□□□□□ -2.27
PTK2-250	ENST00000523746	CEP162	Q5TB80	1403 aa		0.89	□□□□□ -2.27
PTK2-250	ENST00000523746	MAP3K1	Q13233	1512 aa		0.89	□□□□□ -2.27
PTK2-250	ENST00000523746	LRRC37A3	O60309	1634 aa		0.89	□□□□□ -2.27
PTK2-250	ENST00000523746	ARAP2	Q8WZ64	1704 aa		0.89	□□□□□ -2.27
PTK2-250	ENST00000523746	WNK3	Q9BYP7	1800 aa		0.89	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms