RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ALKAL2Q6UX46 152 aa11.53□□□□□ -0.56
CCNC-213ENST00000523541 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
CCNC-213ENST00000523541 NEXN-AS1Q8NBZ9 246 aa11.53□□□□□ -0.56
CCNC-213ENST00000523541 RMI2Q96E14 147 aa11.53□□□□□ -0.56
CCNC-213ENST00000523541 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
CCNC-213ENST00000523541 A0A087WX48 190 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 H7C1H1 209 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 Q8N1X5 172 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
CCNC-213ENST00000523541 MUC21A0A0G2JKD1 596 aa11.51□□□□□ -0.57
CCNC-213ENST00000523541 MUC21A0A140T8X8 626 aa11.51□□□□□ -0.57
CCNC-213ENST00000523541 TRGC1P0CF51 173 aa11.51□□□□□ -0.57
CCNC-213ENST00000523541 SSTP61278 116 aa11.51□□□□□ -0.57
CCNC-213ENST00000523541 ABCA13Q86UQ4 5058 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 IGLV5-52A0A0A0MRZ9 124 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 GZMBP10144 247 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 GCSHP23434 173 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 OCC1Q8TAD7 63 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
CCNC-213ENST00000523541 Q0VG73 95 aa11.49□□□□□ -0.57
CCNC-213ENST00000523541 LYZL1Q6UWQ5 148 aa11.49□□□□□ -0.57
CCNC-213ENST00000523541 Q8N3U1 123 aa11.49□□□□□ -0.57
CCNC-213ENST00000523541 Q8N814 137 aa11.49□□□□□ -0.57
CCNC-213ENST00000523541 CNFNQ9BYD5 112 aa11.49□□□□□ -0.57
CCNC-213ENST00000523541 M0QY20 66 aa11.48□□□□□ -0.57
CCNC-213ENST00000523541 NTF3P20783 257 aa11.48□□□□□ -0.57
CCNC-213ENST00000523541 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
CCNC-213ENST00000523541 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 CTRLP40313 264 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 FAM231DQ6ZW35 169 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 FRZBQ92765 325 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 DPH3P1Q9H4G8 78 aa11.47□□□□□ -0.57
CCNC-213ENST00000523541 K7EN84 100 aa11.46□□□□□ -0.57
CCNC-213ENST00000523541 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
CCNC-213ENST00000523541 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
CCNC-213ENST00000523541 EPM2AB3EWF7 344 aa11.45□□□□□ -0.58
CCNC-213ENST00000523541 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
CCNC-213ENST00000523541 EIF5A2Q9GZV4 153 aaKnown RBP11.45□□□□□ -0.58
CCNC-213ENST00000523541 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
CCNC-213ENST00000523541 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 A8MWL6 223 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 LECT2O14960 151 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 MGPP08493 103 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
CCNC-213ENST00000523541 TWIST1Q15672 202 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 CT83Q5H943 113 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 Q8N976 141 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 FAM210AQ96ND0 272 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 CHCHD5Q9BSY4 110 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
CCNC-213ENST00000523541 IGKV2D-24A0A075B6R9 120 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 IQCJQ1A5X6 159 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 NTM-AS1Q6ZSK4 140 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 TMEM70Q9BUB7 260 aa11.43□□□□□ -0.58
CCNC-213ENST00000523541 A0A1B0GVG6 124 aa11.42□□□□□ -0.58
CCNC-213ENST00000523541 GATCO43716 136 aaKnown RBP11.42□□□□□ -0.58
CCNC-213ENST00000523541 NKX2-5P52952 324 aaPredicted RBP11.42□□□□□ -0.58
CCNC-213ENST00000523541 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
CCNC-213ENST00000523541 PGLYRP4Q96LB8 373 aa11.42□□□□□ -0.58
CCNC-213ENST00000523541 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
CCNC-213ENST00000523541 FAM231BA6NCW3 169 aa11.41□□□□□ -0.58
CCNC-213ENST00000523541 XGP55808 180 aa11.41□□□□□ -0.58
CCNC-213ENST00000523541 SMIM7Q9BQ49 75 aa11.41□□□□□ -0.58
CCNC-213ENST00000523541 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
CCNC-213ENST00000523541 CRPP02741 224 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 HAMPP81172 84 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 MIAQ16674 131 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 MPV17L2Q567V2 206 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 GTSF1Q8WW33 167 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
CCNC-213ENST00000523541 SMR3BP02814 79 aaPredicted RBP11.39□□□□□ -0.59
CCNC-213ENST00000523541 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
CCNC-213ENST00000523541 CEBPGP53567 150 aa11.39□□□□□ -0.59
CCNC-213ENST00000523541 FAM74A3Q4VXF1 159 aa11.39□□□□□ -0.59
CCNC-213ENST00000523541 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
CCNC-213ENST00000523541 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
CCNC-213ENST00000523541 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
CCNC-213ENST00000523541 A0A1B0GUV1 79 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 SRP19P09132 144 aaKnown RBP11.38□□□□□ -0.59
CCNC-213ENST00000523541 C14orf177Q52M58 125 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 Q5VSD8 79 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 OSTCQ9NRP0 149 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
CCNC-213ENST00000523541 RBX1P62877 108 aa11.37□□□□□ -0.59
CCNC-213ENST00000523541 WFDC2Q14508 124 aa11.37□□□□□ -0.59
CCNC-213ENST00000523541 BORCS7Q96B45 105 aa11.37□□□□□ -0.59
CCNC-213ENST00000523541 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
CCNC-213ENST00000523541 TSKUQ8WUA8 353 aa11.36□□□□□ -0.59
CCNC-213ENST00000523541 TMEM243Q9BU79 118 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms