RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 FAM231AP0DMU4 169 aa14.61□□□□□ -0.07
LSM6-207ENST00000515311 FAM231CP0DMU5 169 aa14.61□□□□□ -0.07
LSM6-207ENST00000515311 Q9UF83 564 aa14.61□□□□□ -0.07
LSM6-207ENST00000515311 LINC00694P0DN24 101 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 RPL36AP83881 106 aaKnown RBP14.6□□□□□ -0.07
LSM6-207ENST00000515311 SH2D6Q7Z4S9 175 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 NEXN-AS1Q8NBZ9 246 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 RPL36ALQ969Q0 106 aaKnown RBP14.6□□□□□ -0.07
LSM6-207ENST00000515311 DNAJC30Q96LL9 226 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 NIT2Q9NQR4 276 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 APLNQ9ULZ1 77 aa14.6□□□□□ -0.07
LSM6-207ENST00000515311 DYNC2H1Q8NCM8 4307 aaKnown RBP14.6□□□□□ -0.07
LSM6-207ENST00000515311 TRBV7-3A0A075B6L6 115 aa14.59□□□□□ -0.07
LSM6-207ENST00000515311 A0A096LPF7 62 aa14.59□□□□□ -0.07
LSM6-207ENST00000515311 SCO1O75880 301 aa14.59□□□□□ -0.07
LSM6-207ENST00000515311 NUDT3O95989 172 aa14.59□□□□□ -0.07
LSM6-207ENST00000515311 PPBPP02775 128 aa14.59□□□□□ -0.07
LSM6-207ENST00000515311 PPP1R17O96001 155 aa14.58□□□□□ -0.08
LSM6-207ENST00000515311 SRIP30626 198 aa14.58□□□□□ -0.08
LSM6-207ENST00000515311 GAGE12JA6NER3 117 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 CKS2P33552 79 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 GAGE1Q13065 139 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 GAGE4Q13068 117 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 GAGE5Q13069 117 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 GAGE13Q4V321 117 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 ZNRF2Q8NHG8 242 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 TNFRSF18Q9Y5U5 241 aa14.57□□□□□ -0.08
LSM6-207ENST00000515311 TRBV6-5A0A0K0K1A5 114 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 NCR2O95944 276 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 APCSP02743 223 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 UBE2D3P61077 147 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 UBE2D2P62837 147 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 NEGR1Q7Z3B1 354 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 ORMDL3Q8N138 153 aa14.56□□□□□ -0.08
LSM6-207ENST00000515311 RPL39LQ96EH5 51 aaKnown RBP14.56□□□□□ -0.08
LSM6-207ENST00000515311 D6R8Y8 96 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 SMKR1H3BMG3 65 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 GAS8-AS1O95177 125 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 OR10J3Q5JRS4 329 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 NRACQ8N912 160 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 STARD9Q9P2P6 4700 aa14.55□□□□□ -0.08
LSM6-207ENST00000515311 COLCA2A8K830 154 aa14.54□□□□□ -0.08
LSM6-207ENST00000515311 RPS10P46783 165 aaKnown RBP14.54□□□□□ -0.08
LSM6-207ENST00000515311 MRPL18Q9H0U6 180 aaKnown RBP14.54□□□□□ -0.08
LSM6-207ENST00000515311 PHOX2AO14813 284 aa14.53□□□□□ -0.08
LSM6-207ENST00000515311 ATP6V0E2Q8NHE4 81 aa14.53□□□□□ -0.08
LSM6-207ENST00000515311 LAMTOR2Q9Y2Q5 125 aa14.53□□□□□ -0.08
LSM6-207ENST00000515311 TRAPPC1Q9Y5R8 145 aa14.53□□□□□ -0.08
LSM6-207ENST00000515311 TIRAPP58753 221 aa14.52□□□□□ -0.09
LSM6-207ENST00000515311 DAZ4Q86SG3 579 aaKnown RBP14.52□□□□□ -0.09
LSM6-207ENST00000515311 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.52□□□□□ -0.09
LSM6-207ENST00000515311 PRELID3AQ96N28 172 aa14.52□□□□□ -0.09
LSM6-207ENST00000515311 ST20Q9HBF5 79 aa14.52□□□□□ -0.09
LSM6-207ENST00000515311 DAZ3Q9NR90 486 aaKnown RBP14.52□□□□□ -0.09
LSM6-207ENST00000515311 TNFRSF6BO95407 300 aa14.51□□□□□ -0.09
LSM6-207ENST00000515311 C20orf78Q9BR46 151 aa14.51□□□□□ -0.09
LSM6-207ENST00000515311 RAB5AP20339 215 aa14.5□□□□□ -0.09
LSM6-207ENST00000515311 FABP9Q0Z7S8 132 aa14.5□□□□□ -0.09
LSM6-207ENST00000515311 GTSF1LQ9H1H1 148 aa14.5□□□□□ -0.09
LSM6-207ENST00000515311 SDHAF1A6NFY7 115 aa14.49□□□□□ -0.09
LSM6-207ENST00000515311 NPYP01303 97 aa14.49□□□□□ -0.09
LSM6-207ENST00000515311 SUMO2P61956 95 aaKnown RBP14.49□□□□□ -0.09
LSM6-207ENST00000515311 LYPD5Q6UWN5 251 aa14.49□□□□□ -0.09
LSM6-207ENST00000515311 TMEM70Q9BUB7 260 aa14.49□□□□□ -0.09
LSM6-207ENST00000515311 CCL18P55774 89 aa14.48□□□□□ -0.09
LSM6-207ENST00000515311 RPL32P62910 135 aaKnown RBP14.48□□□□□ -0.09
LSM6-207ENST00000515311 ESRGQ1W209 222 aa14.48□□□□□ -0.09
LSM6-207ENST00000515311 KIAA1644Q3SXP7 199 aa14.48□□□□□ -0.09
LSM6-207ENST00000515311 POLR2KP53803 58 aaKnown RBP14.47□□□□□ -0.09
LSM6-207ENST00000515311 TMEM97Q5BJF2 176 aa14.47□□□□□ -0.09
LSM6-207ENST00000515311 ALKBH7Q9BT30 221 aaPredicted RBP14.47□□□□□ -0.09
LSM6-207ENST00000515311 IGHV3-38A0A0C4DH36 116 aa14.46□□□□□ -0.09
LSM6-207ENST00000515311 TRBV27A0A0K0K1C4 114 aa14.46□□□□□ -0.09
LSM6-207ENST00000515311 PRSS47A8MTI9 375 aa14.45□□□□□ -0.1
LSM6-207ENST00000515311 I3L3M4 83 aa14.45□□□□□ -0.1
LSM6-207ENST00000515311 VCYO14598 125 aa14.45□□□□□ -0.1
LSM6-207ENST00000515311 PLECQ15149 4684 aaKnown RBP14.45□□□□□ -0.1
LSM6-207ENST00000515311 LELP1Q5T871 98 aa14.44□□□□□ -0.1
LSM6-207ENST00000515311 SMIM2Q9BVW6 85 aa14.44□□□□□ -0.1
LSM6-207ENST00000515311 MAP1LC3AQ9H492 121 aa14.44□□□□□ -0.1
LSM6-207ENST00000515311 MRPS16Q9Y3D3 137 aaKnown RBP14.44□□□□□ -0.1
LSM6-207ENST00000515311 LINC00588Q9Y4M8 146 aa14.44□□□□□ -0.1
LSM6-207ENST00000515311 TRBV6-8A0A0A6YYG3 113 aa14.43□□□□□ -0.1
LSM6-207ENST00000515311 PMCHP20382 165 aa14.43□□□□□ -0.1
LSM6-207ENST00000515311 COTL1Q14019 142 aa14.43□□□□□ -0.1
LSM6-207ENST00000515311 LGALS9CQ6DKI2 356 aa14.43□□□□□ -0.1
LSM6-207ENST00000515311 TRGC2P03986 189 aa14.42□□□□□ -0.1
LSM6-207ENST00000515311 UBE2DNLQ8IWF7 75 aa14.42□□□□□ -0.1
LSM6-207ENST00000515311 UPK3BQ9BT76 320 aa14.42□□□□□ -0.1
LSM6-207ENST00000515311 NTM-AS1Q6ZSK4 140 aa14.41□□□□□ -0.1
LSM6-207ENST00000515311 KIR2DL4Q99706 377 aa14.41□□□□□ -0.1
LSM6-207ENST00000515311 TCAPO15273 167 aa14.4□□□□□ -0.1
LSM6-207ENST00000515311 TSHBP01222 138 aa14.4□□□□□ -0.1
LSM6-207ENST00000515311 IQCJQ1A5X6 159 aa14.4□□□□□ -0.1
LSM6-207ENST00000515311 IGLV2-18A0A075B6J9 118 aa14.39□□□□□ -0.11
LSM6-207ENST00000515311 TRBV25-1A0A075B6N4 114 aa14.39□□□□□ -0.11
LSM6-207ENST00000515311 TRAV8-6A0A0B4J262 113 aa14.39□□□□□ -0.11
LSM6-207ENST00000515311 IGHV1-24A0A0C4DH33 117 aa14.39□□□□□ -0.11
LSM6-207ENST00000515311 LINC00476Q8WZB0 136 aa14.39□□□□□ -0.11
LSM6-207ENST00000515311 NXT2Q9NPJ8 142 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms