RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
TRIO-218ENST00000512070 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
TRIO-218ENST00000512070 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
TRIO-218ENST00000512070 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
TRIO-218ENST00000512070 ADAMTS20P59510 1910 aa11.21□□□□□ -0.61
TRIO-218ENST00000512070 LECT2O14960 151 aa11.21□□□□□ -0.61
TRIO-218ENST00000512070 Q6ZUT4 128 aa11.21□□□□□ -0.61
TRIO-218ENST00000512070 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
TRIO-218ENST00000512070 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.61
TRIO-218ENST00000512070 FXYD2P54710 66 aa11.21□□□□□ -0.62
TRIO-218ENST00000512070 PIEZO1Q92508 2521 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 CTSGP08311 255 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 KRTAP27-1Q3LI81 207 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 PTPRSQ13332 1948 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 A0A096LPF7 62 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 SPAG11BQ08648 103 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 COX7BP24311 80 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 Q6ZSR3 168 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
TRIO-218ENST00000512070 IGHV4-28A0A0C4DH34 117 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 A0A0J9YY99 117 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 RS1O15537 224 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 C4orf3Q8WVX3 66 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 C5orf56Q8N8D9 126 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 FAM167A-AS1Q96KT0 104 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 BPY2O14599 106 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 J3QKU1 62 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
TRIO-218ENST00000512070 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
TRIO-218ENST00000512070 IMUPQ9GZP8 106 aa11.18□□□□□ -0.62
TRIO-218ENST00000512070 NDUFV3P56181 108 aaKnown RBP11.18□□□□□ -0.62
TRIO-218ENST00000512070 WFDC2Q14508 124 aa11.18□□□□□ -0.62
TRIO-218ENST00000512070 BRK1Q8WUW1 75 aa11.18□□□□□ -0.62
TRIO-218ENST00000512070 C2orf70A6NJV1 201 aa11.18□□□□□ -0.62
TRIO-218ENST00000512070 RAI1Q7Z5J4 1906 aaPredicted RBP11.17□□□□□ -0.62
TRIO-218ENST00000512070 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 IGHV4-4A0A075B6R2 117 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 ARTNQ5T4W7 220 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 IGHV4-59P01825 116 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 GTSF1Q8WW33 167 aa11.17□□□□□ -0.62
TRIO-218ENST00000512070 H0Y9J4 135 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 TLN2Q9Y4G6 2542 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 FAM240AA0A1B0GVK7 77 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 PRSS33Q8NF86 280 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 IGKV4-1P06312 121 aa11.16□□□□□ -0.62
TRIO-218ENST00000512070 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 COL4A6Q14031 1691 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 DIAPH2-AS1Q14236 149 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 PRR30Q53SZ7 412 aaPredicted RBP11.15□□□□□ -0.62
TRIO-218ENST00000512070 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
TRIO-218ENST00000512070 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 C10orf105Q8TEF2 133 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 LY6G6EA0A0G2JKS1 128 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 U3KQA8 63 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
TRIO-218ENST00000512070 MYCNOSP40205 109 aa11.13□□□□□ -0.63
TRIO-218ENST00000512070 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
TRIO-218ENST00000512070 FN1P02751 2386 aaKnown RBP11.13□□□□□ -0.63
TRIO-218ENST00000512070 GATA1P15976 413 aaPredicted RBP11.13□□□□□ -0.63
TRIO-218ENST00000512070 SLURP1P55000 103 aa11.13□□□□□ -0.63
TRIO-218ENST00000512070 LTBP2Q14767 1821 aa11.13□□□□□ -0.63
TRIO-218ENST00000512070 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
TRIO-218ENST00000512070 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
TRIO-218ENST00000512070 FAM236DA0A1B0GTK5 79 aa11.12□□□□□ -0.63
TRIO-218ENST00000512070 FAM236CP0DP71 79 aa11.12□□□□□ -0.63
TRIO-218ENST00000512070 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
TRIO-218ENST00000512070 PIP4P1Q86T03 277 aa11.12□□□□□ -0.63
TRIO-218ENST00000512070 LRP4O75096 1905 aa11.12□□□□□ -0.63
TRIO-218ENST00000512070 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
TRIO-218ENST00000512070 MAPK1IP1LQ8NDC0 245 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 Q8N9W7 124 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 P0DMU3 169 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 FAM231AP0DMU4 169 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 FAM231CP0DMU5 169 aa11.11□□□□□ -0.63
TRIO-218ENST00000512070 CLEC2BQ92478 149 aa11.1□□□□□ -0.63
TRIO-218ENST00000512070 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
TRIO-218ENST00000512070 SPRY4Q9C004 299 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms