RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 A0A087WX48 190 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 MGPP08493 103 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 C9orf62Q8N4C0 152 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 FER1L6-AS1Q8NA97 138 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
UBE2D3-228ENST00000508974 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 KCNIP4Q6PIL6 250 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 OR10G8Q8NGN5 311 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 VAX2Q9UIW0 290 aa9.83□□□□□ -0.84
UBE2D3-228ENST00000508974 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 IGKV2D-24A0A075B6R9 120 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 P01737 135 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 KIF25-AS1Q9Y6Z4 181 aa9.82□□□□□ -0.84
UBE2D3-228ENST00000508974 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
UBE2D3-228ENST00000508974 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
UBE2D3-228ENST00000508974 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-228ENST00000508974 RPS20P60866 119 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-228ENST00000508974 MPV17L2Q567V2 206 aa9.8□□□□□ -0.84
UBE2D3-228ENST00000508974 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
UBE2D3-228ENST00000508974 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-228ENST00000508974 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
UBE2D3-228ENST00000508974 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
UBE2D3-228ENST00000508974 XKRY2A2RUG3 117 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 C15orf54Q8N8G6 183 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 NUDT10Q8NFP7 164 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 RMI2Q96E14 147 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
UBE2D3-228ENST00000508974 NKX2-5P52952 324 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 CEBPGP53567 150 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 CACNG7P62955 275 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 ELOBQ15370 118 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 Q5VSD8 79 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 Q8N976 141 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 DEFB104AQ8WTQ1 72 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-228ENST00000508974 K7EN84 100 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 CRPP02741 224 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 GAGE6Q13070 117 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 CLPSL2Q6UWE3 100 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 OCC1Q8TAD7 63 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 FRZBQ92765 325 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 BIN3Q9NQY0 253 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 COX11Q9Y6N1 276 aa9.77□□□□□ -0.85
UBE2D3-228ENST00000508974 F2Z2F3 143 aa9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 M0QY20 66 aa9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 NTF3P20783 257 aa9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 TAGLN2P37802 199 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 RPP21Q9H633 154 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 FAM30AQ9NZY2 134 aa9.76□□□□□ -0.85
UBE2D3-228ENST00000508974 H7C1H1 209 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 BLOC1S1P78537 153 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 ATRAIDQ6UW56 229 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 ENHOQ6UWT2 76 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 TMEM70Q9BUB7 260 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 C1orf43Q9BWL3 253 aa9.75□□□□□ -0.85
UBE2D3-228ENST00000508974 FAT1Q14517 4588 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 A0A1B0GVG6 124 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 CTRLP40313 264 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 Q0VG73 95 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 TWIST1Q15672 202 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
UBE2D3-228ENST00000508974 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
UBE2D3-228ENST00000508974 RASL11AQ6T310 242 aa9.73□□□□□ -0.85
UBE2D3-228ENST00000508974 TRAV26-2A0A0B4J265 109 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 LOC100996750A0A140TA64 210 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 RBX1P62877 108 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 KRTAP4-6Q9BYQ5 205 aa9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-228ENST00000508974 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
UBE2D3-228ENST00000508974 GATCO43716 136 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-228ENST00000508974 PKIAP61925 76 aa9.71□□□□□ -0.86
UBE2D3-228ENST00000508974 LINC00269Q8N2A0 174 aa9.71□□□□□ -0.86
UBE2D3-228ENST00000508974 GTSF1Q8WW33 167 aa9.71□□□□□ -0.86
UBE2D3-228ENST00000508974 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
UBE2D3-228ENST00000508974 FOXA3P55318 350 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-228ENST00000508974 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
UBE2D3-228ENST00000508974 LYPD6BQ8NI32 183 aa9.7□□□□□ -0.86
UBE2D3-228ENST00000508974 NIT2Q9NQR4 276 aa9.7□□□□□ -0.86
UBE2D3-228ENST00000508974 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
UBE2D3-228ENST00000508974 MIAQ16674 131 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms