RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RTTNQ86VV8 2226 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-209ENST00000508871 SRRM5B3KS81 715 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV1-46P01743 117 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 UNC13CQ8NB66 2214 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 A0A0J9YX75 114 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 PPYP01298 95 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 EIF4EBP1Q13541 118 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-209ENST00000508871 CACNA1DQ01668 2161 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 C19orf84I3L1E1 186 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 LY6G6DO95868 133 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 ACYP1P07311 99 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 ZNF581Q9P0T4 197 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 IGLC1P0CG04 106 aa2.86□□□□□ -1.95
NEDD4-209ENST00000508871 C9orf47Q6ZRZ4 202 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 FREM3P0C091 2139 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 IGHV3-53P01767 116 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 C11orf1Q9H5F2 150 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 MYO9BQ13459 2157 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 CFDP00746 253 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1-39P01597 117 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 IGKV1D-39P04432 117 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 LAMA2P24043 3122 aaKnown RBP2.85□□□□□ -1.95
NEDD4-209ENST00000508871 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 ATP11AUNQ6ZP68 121 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 Q6ZR03 302 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 NEXN-AS1Q8NBZ9 246 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 REG4Q9BYZ8 158 aa2.85□□□□□ -1.95
NEDD4-209ENST00000508871 PROP1O75360 226 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 NABP2Q9BQ15 211 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 CYTL1Q9NRR1 136 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 KAAG1Q9UBP8 84 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 KIAA2026Q5HYC2 2103 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 GNRH2O43555 120 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 PGLYRP1O75594 196 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-209ENST00000508871 FXYD2P54710 66 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 C4orf3Q8WVX3 66 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 TMSB15BA0A087X1C1 80 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 C7orf77A4D0Y5 90 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 BAALC-AS2P0C853 105 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 TMEM190Q8WZ59 177 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 GAFA1Q96PS6 74 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.95
NEDD4-209ENST00000508871 TRBV10-2A0A0K0K1G8 114 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 RBAKDNA6NC62 111 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 K7EM74 188 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 OXTP01178 125 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 LINC00312Q9Y6C7 94 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 PSCAO43653 123 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 SERP2Q8N6R1 65 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 CARD19Q96LW7 228 aa2.84□□□□□ -1.96
NEDD4-209ENST00000508871 NMSQ5H8A3 153 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 Q6ZPA2 131 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 Q6ZQT7 251 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 LINC00269Q8N2A0 174 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 PRO1854Q9UHT4 67 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 LYZP61626 148 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 Q5BKY6 102 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 ASXL3Q9C0F0 2248 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 F5P12259 2224 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 IGKV1D-17A0A075B6S4 117 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 WWC2-AS2Q96NR7 200 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 KLK9Q9UKQ9 250 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 KLK5Q9Y337 293 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-209ENST00000508871 HCFC1P51610 2035 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 ASCC3Q8N3C0 2202 aaKnown RBP2.83□□□□□ -1.96
NEDD4-209ENST00000508871 SFTA3P0C7M3 94 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 P0C879 139 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 SDIM1Q6ZPB5 146 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 TMEM14CQ9P0S9 112 aa2.83□□□□□ -1.96
NEDD4-209ENST00000508871 DNAJC9-AS1A6NH13 148 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 GNB1P62873 340 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 TFF3Q07654 80 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 UBALD1Q8TB05 177 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 TRBV10-3A0A0K0K1G6 114 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 CGB3P0DN86 165 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 CGB7P0DN87 165 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 ADCYAP1P18509 176 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 XCL1P47992 114 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 ZNF137PP52743 207 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 PROK1P58294 105 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 ZNF833PQ6ZTB9 187 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 NPBQ8NG41 125 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 A0A1W2PPM0 123 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 CEND1Q8N111 149 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 MKI67P46013 3256 aaKnown RBP2.82□□□□□ -1.96
NEDD4-209ENST00000508871 NCOA6Q14686 2063 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-209ENST00000508871 C17orf98A8MV24 154 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 FXYD4P59646 89 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 LYPD1Q8N2G4 141 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 RNF5Q99942 180 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 CEBPZOSA8MTT3 80 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 GTSF1Q8WW33 167 aa2.82□□□□□ -1.96
NEDD4-209ENST00000508871 M0R1W7 72 aa2.81□□□□□ -1.96
NEDD4-209ENST00000508871 BPY2O14599 106 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms