RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 RPL18AQ02543 176 aaKnown RBP5.25□□□□□ -1.57
CLCN3-206ENST00000507875 DAZ2Q13117 558 aaKnown RBP5.25□□□□□ -1.57
CLCN3-206ENST00000507875 DAZ4Q86SG3 579 aaKnown RBP5.25□□□□□ -1.57
CLCN3-206ENST00000507875 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
CLCN3-206ENST00000507875 ZNF414Q96IQ9 312 aa5.25□□□□□ -1.57
CLCN3-206ENST00000507875 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
CLCN3-206ENST00000507875 DAZ3Q9NR90 486 aaKnown RBP5.25□□□□□ -1.57
CLCN3-206ENST00000507875 S4R3C0 116 aa5.25□□□□□ -1.57
CLCN3-206ENST00000507875 TRBV19A0A075B6N1 114 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 TRBV6-1A0A0K0K1D8 114 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 GRIFINA4D1Z8 144 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 IGHV3-23P01764 117 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 IGLC2P0DOY2 106 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 CRISP2P16562 243 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 FHL2Q14192 279 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 IQCJQ1A5X6 159 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 TMEM136Q6ZRR5 245 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 TRPT1Q86TN4 253 aaKnown RBP5.24□□□□□ -1.57
CLCN3-206ENST00000507875 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 CMTM2Q8TAZ6 248 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 FAM19A4Q96LR4 140 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 SLC50A1Q9BRV3 221 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 RBM12B-AS1Q9P1G2 102 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 LINC01619G3V211 115 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 NUPR1O60356 82 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 Q0VG73 95 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 ZNF575Q86XF7 245 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 C1orf158Q8N1D5 194 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-206ENST00000507875 OR5A1Q8NGJ0 315 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 TSKUQ8WUA8 353 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 AP1S3Q96PC3 154 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 TP53TG3Q9ULZ0 132 aa5.24□□□□□ -1.57
CLCN3-206ENST00000507875 STAB1Q9NY15 2570 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 IGHV7-4-1A0A0J9YVY3 117 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 TEX48A0A1B0GUV7 120 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 HLA-DQA1P01909 254 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
CLCN3-206ENST00000507875 NUP35Q8NFH5 326 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 LINC01587Q99440 93 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 TRAV2A0A0B4J234 112 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 IGLV2-11P01706 119 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 LINC00322Q6ZN03 302 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-206ENST00000507875 Q6ZRP5 223 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 ZNF492Q9P255 531 aa5.23□□□□□ -1.57
CLCN3-206ENST00000507875 TRAV8-1A0A0A6YYK1 113 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 A0A1B0GXF2 115 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 C19orf71A6NCJ1 209 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 HIGD1CA8MV81 97 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 IGHV3-11P01762 117 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 FOXI2Q6ZQN5 318 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 Q86TA4 180 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 NDUFA11Q86Y39 141 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 RPP21Q9H633 154 aaKnown RBP5.22□□□□□ -1.57
CLCN3-206ENST00000507875 TRBV20-1A0A075B6N2 111 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 A8MWL6 223 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 SERF1AO75920 110 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 APCSP02743 223 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 INAFM2P0DMQ5 153 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 CSN1S1P47710 185 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 NDUFV3P56181 108 aaKnown RBP5.22□□□□□ -1.57
CLCN3-206ENST00000507875 LCN12Q6JVE5 192 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 ATP5L2Q7Z4Y8 100 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 PRNTQ86SH4 94 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 Q8N1X5 172 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 TMEM75Q8N9X5 138 aa5.22□□□□□ -1.57
CLCN3-206ENST00000507875 RBAKDNA6NC62 111 aa5.21□□□□□ -1.57
CLCN3-206ENST00000507875 J3QR89 54 aa5.21□□□□□ -1.57
CLCN3-206ENST00000507875 MT-ATP8P03928 68 aa5.21□□□□□ -1.57
CLCN3-206ENST00000507875 PFN2P35080 140 aa5.21□□□□□ -1.57
CLCN3-206ENST00000507875 GFRA4Q9GZZ7 299 aa5.21□□□□□ -1.57
CLCN3-206ENST00000507875 A0A087WW49 117 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 A0A1B0GWB2 263 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 LYRM9A8MSI8 78 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 F2Z2F3 143 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 TRBV12-3P01733 135 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 KLHL30-AS1Q8NEE0 82 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 GTSF1Q8WW33 167 aa5.21□□□□□ -1.58
CLCN3-206ENST00000507875 FBN3Q75N90 2809 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 RBMY1BA6NDE4 496 aaKnown RBP5.2□□□□□ -1.58
CLCN3-206ENST00000507875 RBMY1EA6NEQ0 496 aaKnown RBP5.2□□□□□ -1.58
CLCN3-206ENST00000507875 OVOL1O14753 267 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 GPX1P07203 203 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 RBMY1DP0C7P1 496 aaKnown RBP5.2□□□□□ -1.58
CLCN3-206ENST00000507875 RBMY1A1P0DJD3 496 aaKnown RBP5.2□□□□□ -1.58
CLCN3-206ENST00000507875 CMC4P56277 68 aaPredicted RBP5.2□□□□□ -1.58
CLCN3-206ENST00000507875 GDF5OSQ5U4N7 250 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 DEFB125Q8N687 156 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 VAMP8Q9BV40 100 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 PYGO1Q9Y3Y4 419 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 M0R3E3 92 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 C10orf99Q6UWK7 81 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 OR4B1Q8NGF8 309 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 C18orf15Q96N68 181 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 SAMD10Q9BYL1 202 aa5.2□□□□□ -1.58
CLCN3-206ENST00000507875 SMAD5-AS1Q9Y6J3 95 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms