RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 MRPL35Q9NZE8 188 aaKnown RBP16.14■□□□□ 0.17
RNF4-207ENST00000506706 SETXQ7Z333 2677 aaKnown RBP16.14■□□□□ 0.17
RNF4-207ENST00000506706 LINC00482Q8N8I6 264 aa16.14■□□□□ 0.17
RNF4-207ENST00000506706 C19orf73Q9NVV2 129 aa16.14■□□□□ 0.17
RNF4-207ENST00000506706 IGHV3OR16-12A0A075B7B8 117 aa16.13■□□□□ 0.17
RNF4-207ENST00000506706 IGHV3-73A0A0B4J1V6 119 aa16.13■□□□□ 0.17
RNF4-207ENST00000506706 CRLF1O75462 422 aa16.13■□□□□ 0.17
RNF4-207ENST00000506706 UFSP1Q6NVU6 142 aa16.13■□□□□ 0.17
RNF4-207ENST00000506706 HHLA3Q9XRX5 114 aa16.13■□□□□ 0.17
RNF4-207ENST00000506706 AZU1P20160 251 aa16.12■□□□□ 0.17
RNF4-207ENST00000506706 LURAP1LQ8IV03 231 aa16.12■□□□□ 0.17
RNF4-207ENST00000506706 WFDC10AQ9H1F0 79 aa16.12■□□□□ 0.17
RNF4-207ENST00000506706 HINT1P49773 126 aaPredicted RBP16.11■□□□□ 0.17
RNF4-207ENST00000506706 RIPPLY3P57055 190 aa16.11■□□□□ 0.17
RNF4-207ENST00000506706 CFAP126Q5VTH2 177 aa16.11■□□□□ 0.17
RNF4-207ENST00000506706 NEXN-AS1Q8NBZ9 246 aa16.11■□□□□ 0.17
RNF4-207ENST00000506706 TP53TG1Q9Y2A0 90 aa16.11■□□□□ 0.17
RNF4-207ENST00000506706 TCTAP57738 103 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 COL5A1-AS1Q5SY13 56 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 DEFB104AQ8WTQ1 72 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 MRPL16Q9NX20 251 aaKnown RBP16.1■□□□□ 0.17
RNF4-207ENST00000506706 FGF6P10767 208 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 PLNP26678 52 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 BAALCQ8WXS3 180 aa16.1■□□□□ 0.17
RNF4-207ENST00000506706 F8VRH5 84 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 I3L3M4 83 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 RHODO00212 210 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 RHOHQ15669 191 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 CHTOPQ9Y3Y2 248 aaKnown RBP16.09■□□□□ 0.17
RNF4-207ENST00000506706 NMUP48645 174 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 BOD1L2Q8IYS8 172 aa16.09■□□□□ 0.17
RNF4-207ENST00000506706 RPL35AP18077 110 aaKnown RBP16.08■□□□□ 0.16
RNF4-207ENST00000506706 ZC2HC1BQ5TFG8 222 aa16.08■□□□□ 0.16
RNF4-207ENST00000506706 RS1O15537 224 aa16.07■□□□□ 0.16
RNF4-207ENST00000506706 IL17DQ8TAD2 202 aa16.07■□□□□ 0.16
RNF4-207ENST00000506706 IGIPA6NJ69 53 aa16.07■□□□□ 0.16
RNF4-207ENST00000506706 GIG44P09565 113 aaPredicted RBP16.07■□□□□ 0.16
RNF4-207ENST00000506706 RNASE8Q8TDE3 154 aaKnown RBP16.07■□□□□ 0.16
RNF4-207ENST00000506706 DLEU1O43261 78 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 TSHBP01222 138 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 RPL39P62891 51 aaKnown RBP16.06■□□□□ 0.16
RNF4-207ENST00000506706 C2orf91Q6ZV80 131 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 TMEM263Q8WUH6 116 aaKnown RBP16.06■□□□□ 0.16
RNF4-207ENST00000506706 TMEM141Q96I45 108 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 C1QTNF4Q9BXJ3 329 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 NACAE9PAV3 2078 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 P0DMU3 169 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 FAM231AP0DMU4 169 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 FAM231CP0DMU5 169 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 GTSCR1Q86UQ5 136 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 TIMM17AQ99595 171 aa16.06■□□□□ 0.16
RNF4-207ENST00000506706 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
RNF4-207ENST00000506706 PRSS29PA6NIE9 313 aa16.05■□□□□ 0.16
RNF4-207ENST00000506706 MPV17L2Q567V2 206 aa16.05■□□□□ 0.16
RNF4-207ENST00000506706 TNFRSF18Q9Y5U5 241 aa16.05■□□□□ 0.16
RNF4-207ENST00000506706 FN1P02751 2386 aaKnown RBP16.04■□□□□ 0.16
RNF4-207ENST00000506706 Q6ZSN1 163 aa16.04■□□□□ 0.16
RNF4-207ENST00000506706 C12orf54Q6X4T0 127 aa16.04■□□□□ 0.16
RNF4-207ENST00000506706 PCP2Q8IVA1 136 aa16.04■□□□□ 0.16
RNF4-207ENST00000506706 IGKV2D-26A0A0A0MRZ7 120 aa16.03■□□□□ 0.16
RNF4-207ENST00000506706 IGHV3-53P01767 116 aa16.03■□□□□ 0.16
RNF4-207ENST00000506706 TRGV1A0A0A0MS02 117 aa16.03■□□□□ 0.16
RNF4-207ENST00000506706 INSL3P51460 131 aa16.03■□□□□ 0.16
RNF4-207ENST00000506706 SIVA1O15304 175 aa16.02■□□□□ 0.15
RNF4-207ENST00000506706 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.02■□□□□ 0.15
RNF4-207ENST00000506706 HIVEP1P15822 2718 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 DNAJC30Q96LL9 226 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 PMVKQ15126 192 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 C20orf203Q8NBC4 194 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 OR4C5Q8NGB2 326 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 C2CD3Q4AC94 2353 aa16.01■□□□□ 0.15
RNF4-207ENST00000506706 BVES-AS1Q5T3Y7 98 aa16■□□□□ 0.15
RNF4-207ENST00000506706 C9orf66Q5T8R8 295 aa16■□□□□ 0.15
RNF4-207ENST00000506706 CSNK1G2-AS1Q8NCQ2 148 aa16■□□□□ 0.15
RNF4-207ENST00000506706 C16orf74Q96GX8 76 aa16■□□□□ 0.15
RNF4-207ENST00000506706 CITED1Q99966 193 aa15.99■□□□□ 0.15
RNF4-207ENST00000506706 NIPBLQ6KC79 2804 aaeCLIP15.98■□□□□ 0.15
RNF4-207ENST00000506706 DAZ2Q13117 558 aaKnown RBP15.98■□□□□ 0.15
RNF4-207ENST00000506706 TMEM97Q5BJF2 176 aa15.98■□□□□ 0.15
RNF4-207ENST00000506706 CST9LQ9H4G1 147 aa15.98■□□□□ 0.15
RNF4-207ENST00000506706 Q9UF83 564 aa15.98■□□□□ 0.15
RNF4-207ENST00000506706 Q6ZTI0 123 aa15.97■□□□□ 0.15
RNF4-207ENST00000506706 PAPPA-AS1Q5QFB9 102 aa15.96■□□□□ 0.15
RNF4-207ENST00000506706 NOP10Q9NPE3 64 aaKnown RBP15.96■□□□□ 0.15
RNF4-207ENST00000506706 TRAV4A0A0B4J268 109 aa15.95■□□□□ 0.14
RNF4-207ENST00000506706 RRN3P1Q2M238 152 aa15.95■□□□□ 0.14
RNF4-207ENST00000506706 SPATA3Q8NHX4 192 aa15.95■□□□□ 0.14
RNF4-207ENST00000506706 TTTY13Q9BZ97 58 aa15.95■□□□□ 0.14
RNF4-207ENST00000506706 ZNF479Q96JC4 524 aa15.95■□□□□ 0.14
RNF4-207ENST00000506706 IGLV4-69A0A075B6H9 119 aa15.94■□□□□ 0.14
RNF4-207ENST00000506706 PLAC8L1A1L4L8 177 aa15.94■□□□□ 0.14
RNF4-207ENST00000506706 TRAV8-6A0A0B4J262 113 aa15.93■□□□□ 0.14
RNF4-207ENST00000506706 HSD52Q0P140 79 aa15.93■□□□□ 0.14
RNF4-207ENST00000506706 JMJD1CQ15652 2540 aa15.92■□□□□ 0.14
RNF4-207ENST00000506706 OPRPNQ99935 248 aaPredicted RBP15.92■□□□□ 0.14
RNF4-207ENST00000506706 HIGD1BQ9P298 99 aa15.92■□□□□ 0.14
RNF4-207ENST00000506706 C11orf86A6NJI1 115 aa15.91■□□□□ 0.14
RNF4-207ENST00000506706 OVOL2Q9BRP0 275 aa15.91■□□□□ 0.14
RNF4-207ENST00000506706 PYGO1Q9Y3Y4 419 aa15.91■□□□□ 0.14
RNF4-207ENST00000506706 ZNF25P17030 456 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms