RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GAGE12IP0CL82 117 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 SPART-AS1P0CW21 52 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 FABP4P15090 132 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 GATA1P15976 413 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 AKR1D1P51857 326 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 EMP1P54849 157 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 LINC00310P59036 64 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 PDZD11Q5EBL8 140 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 PRADC1Q9BSG0 188 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 C11orf68Q9H3H3 251 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 HSPB8Q9UJY1 196 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 TNFRSF18Q9Y5U5 241 aa5.81□□□□□ -1.48
TOPBP1-202ENST00000503338 VWFP04275 2813 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 IGLV2-18A0A075B6J9 118 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 TRGV4A0A0C4DH28 118 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 TRBV27A0A0K0K1C4 114 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 SDHAF1A6NFY7 115 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 K7EIL1 84 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 K7EQD1 137 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 NUPR1O60356 82 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 HBDP02042 147 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 DAD1P61803 113 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 RPL36AP83881 106 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 LAGE3Q14657 143 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 FAM222AQ5U5X8 452 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 RPL36ALQ969Q0 106 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 RPL39LQ96EH5 51 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 ZNF479Q96JC4 524 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 TMEM70Q9BUB7 260 aa5.8□□□□□ -1.48
TOPBP1-202ENST00000503338 IGHV1-24A0A0C4DH33 117 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 IFITM10A6NMD0 228 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 I3L3M4 83 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 LEPROTL1O95214 131 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 FCER1GP30273 86 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 RHOHQ15669 191 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 DEFB121Q5J5C9 76 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 OR10D4PQ8NGN7 298 aa5.79□□□□□ -1.48
TOPBP1-202ENST00000503338 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 ATP5G1P05496 136 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 DAZ4Q86SG3 579 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 NEXN-AS1Q8NBZ9 246 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 TM2D3Q9BRN9 247 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 DAZ3Q9NR90 486 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-202ENST00000503338 ATP5LO75964 103 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 NUDT3O95989 172 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 SMIM6P0DI80 62 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 FHL2Q14192 279 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 TMEM97Q5BJF2 176 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 SBSPONQ8IVN8 264 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 PRO0255Q9UI72 69 aa5.77□□□□□ -1.49
TOPBP1-202ENST00000503338 C20orf202A1L168 122 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 BTF3P20290 206 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 SMAGPQ0VAQ4 97 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 COTL1Q14019 142 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 Q6ZSN1 163 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 SH2D6Q7Z4S9 175 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 SLC25A29Q8N8R3 303 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 MRAPQ8TCY5 172 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 MAP1LC3CQ9BXW4 147 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 HHLA3Q9XRX5 114 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 CYSLTR1Q9Y271 337 aa5.76□□□□□ -1.49
TOPBP1-202ENST00000503338 NACAE9PAV3 2078 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 DEFB4AO15263 64 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 PRB2P02812 416 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 NPSP0C0P6 89 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 P0DMU3 169 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 FAM231AP0DMU4 169 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 FAM231CP0DMU5 169 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 CRYBA4P53673 196 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 KRTDAPP60985 99 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 UBE2D3P61077 147 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 UBE2D2P62837 147 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 PMCHL1Q16048 86 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 C2orf66Q6UXQ4 117 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 ZNRF2Q8NHG8 242 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 TOMM6Q96B49 74 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 IFI27L1Q96BM0 104 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 GTSF1LQ9H1H1 148 aa5.75□□□□□ -1.49
TOPBP1-202ENST00000503338 ANK2Q01484 3957 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 A0A096LNJ9 63 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 PAX4O43316 350 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 NHLRC4P0CG21 123 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 ERASQ7Z444 233 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 SPATA12Q7Z6I5 190 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 B9D2Q9BPU9 175 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms