RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LAMB1P07942 1786 aa0.29□□□□□ -2.36
CLK1-213ENST00000492793 GRIN2AQ12879 1464 aa0.29□□□□□ -2.36
CLK1-213ENST00000492793 CDK13Q14004 1512 aaKnown RBP0.28□□□□□ -2.36
CLK1-213ENST00000492793 KDM6BO15054 1643 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 NRXN2Q9P2S2 1712 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 CADP27708 2225 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 FAM92AA1XBS5 289 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 K7EP13 123 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 ZNF818PQ6ZRF7 136 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 ARL11Q969Q4 196 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 TSC22D3Q99576 134 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 PDCD10Q9BUL8 212 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 AGPAT4-IT1Q9H0P7 198 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 TTC28Q96AY4 2481 aa0.28□□□□□ -2.36
CLK1-213ENST00000492793 DAPK1P53355 1430 aa0.28□□□□□ -2.37
CLK1-213ENST00000492793 SSC5DA1L4H1 1573 aa0.28□□□□□ -2.37
CLK1-213ENST00000492793 FAM25AB3EWG3 89 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 FAM25CB3EWG5 89 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 FAM25GB3EWG6 89 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 ACYP2P14621 99 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 Q6ZRX8 168 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 LSM10Q969L4 123 aaKnown RBP0.27□□□□□ -2.37
CLK1-213ENST00000492793 WFDC6Q9BQY6 131 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 LINC00312Q9Y6C7 94 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 MYOM3Q5VTT5 1437 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 ZNF518AQ6AHZ1 1483 aa0.27□□□□□ -2.37
CLK1-213ENST00000492793 TRBV10-3A0A0K0K1G6 114 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 TMEM14DPA8MWL7 114 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 APOC4-APOC2K7ER74 178 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 APODP05090 189 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 CCL8P80075 99 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 MEIG1Q5JSS6 88 aa0.26□□□□□ -2.37
CLK1-213ENST00000492793 SNRNP25Q9BV90 132 aaKnown RBP0.26□□□□□ -2.37
CLK1-213ENST00000492793 ARFGEF1Q9Y6D6 1849 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 IFT140Q96RY7 1462 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 LOC100130705A0A1B0GUX0 176 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 HCG22E2RYF7 251 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 NMBP08949 121 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 RBM3P98179 157 aaKnown RBP0.25□□□□□ -2.37
CLK1-213ENST00000492793 INSL4Q14641 139 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 RERGLQ9H628 205 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 KMT2DO14686 5537 aa0.25□□□□□ -2.37
CLK1-213ENST00000492793 PARP14Q460N5 1801 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 SIX6O95475 246 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 Q8N8P6 123 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 COPS9Q8WXC6 57 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 SCP2D1Q9UJQ7 156 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 SERP1Q9Y6X1 66 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 ABCA12Q86UK0 2595 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 ZFYVE26Q68DK2 2539 aa0.24□□□□□ -2.37
CLK1-213ENST00000492793 ZMYM4Q5VZL5 1548 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 CFTRP13569 1480 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 CASKIN1Q8WXD9 1431 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 TRAV1-2A0A0B4J238 106 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 SPINK1P00995 79 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 GCHFRP30047 84 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 Q6AWC8 147 aa0.23□□□□□ -2.37
CLK1-213ENST00000492793 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.23□□□□□ -2.37
CLK1-213ENST00000492793 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
CLK1-213ENST00000492793 SPEF2Q9C093 1822 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 TRAV13-2A0A0B4J235 113 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 G3V318 75 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 BTG2P78543 158 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 COX6A2Q02221 97 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 C1orf54Q8WWF1 131 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 NAA60Q9H7X0 242 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 MYH9P35579 1960 aaKnown RBP0.22□□□□□ -2.37
CLK1-213ENST00000492793 GOLGA3Q08378 1498 aa0.22□□□□□ -2.37
CLK1-213ENST00000492793 F8P00451 2351 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 PHLPP1O60346 1717 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 LAMC3Q9Y6N6 1575 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 SPAARA0A1B0GVQ0 90 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 Q56UQ5 140 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 Q5VV11 94 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 C12orf73Q69YU5 71 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 BAGE3Q86Y29 109 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 FOCADQ5VW36 1801 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
CLK1-213ENST00000492793 ANK2Q01484 3957 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 MBD5Q9P267 1494 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 AHCTF1Q8WYP5 2266 aa0.21□□□□□ -2.38
CLK1-213ENST00000492793 PIGBOS1A0A0B4J2F0 54 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 PPP1R17O96001 155 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 FGF7P21781 194 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 CCL18P55774 89 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 Q5BKY6 102 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 C10orf128Q5T292 105 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 RPL13AP3Q6NVV1 102 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
CLK1-213ENST00000492793 CACNA1CQ13936 2221 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 ROCK2O75116 1388 aaKnown RBP0.19□□□□□ -2.38
CLK1-213ENST00000492793 SIPA1L3O60292 1781 aaPredicted RBP0.19□□□□□ -2.38
CLK1-213ENST00000492793 MYH7P12883 1935 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 EFCAB10A6NFE3 127 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 MIF4GDA9UHW6 222 aaKnown RBP0.19□□□□□ -2.38
CLK1-213ENST00000492793 SMIM6P0DI80 62 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 SARNPP82979 210 aaKnown RBP0.19□□□□□ -2.38
CLK1-213ENST00000492793 SSBP3-AS1Q7Z2R9 100 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms