RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TOR2AQ5JU69 321 aa16.59■□□□□ 0.25
HMGN1-217ENST00000489072 NUDT10Q8NFP7 164 aa16.59■□□□□ 0.25
HMGN1-217ENST00000489072 NUDT11Q96G61 164 aa16.59■□□□□ 0.25
HMGN1-217ENST00000489072 BIN3Q9NQY0 253 aa16.59■□□□□ 0.25
HMGN1-217ENST00000489072 TRBV6-8A0A0A6YYG3 113 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 K7EN84 100 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 GCSHP23434 173 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 XGP55808 180 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 LYPD6BQ8NI32 183 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 KLK12Q9UKR0 248 aa16.58■□□□□ 0.24
HMGN1-217ENST00000489072 IGLV5-52A0A0A0MRZ9 124 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 XKRY2A2RUG3 117 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 CACNG7P62955 275 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 LYZL1Q6UWQ5 148 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 OCC1Q8TAD7 63 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 NTN5Q8WTR8 489 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-217ENST00000489072 CHCHD7Q9BUK0 85 aa16.57■□□□□ 0.24
HMGN1-217ENST00000489072 A0A087WX48 190 aa16.56■□□□□ 0.24
HMGN1-217ENST00000489072 MGPP08493 103 aa16.56■□□□□ 0.24
HMGN1-217ENST00000489072 F2Z2F3 143 aa16.55■□□□□ 0.24
HMGN1-217ENST00000489072 RNASE7Q9H1E1 156 aaKnown RBP16.55■□□□□ 0.24
HMGN1-217ENST00000489072 M0QY20 66 aa16.54■□□□□ 0.24
HMGN1-217ENST00000489072 LECT2O14960 151 aa16.54■□□□□ 0.24
HMGN1-217ENST00000489072 NTM-AS1Q6ZSK4 140 aa16.54■□□□□ 0.24
HMGN1-217ENST00000489072 TMEM250H0YL14 139 aa16.53■□□□□ 0.24
HMGN1-217ENST00000489072 CTRLP40313 264 aa16.53■□□□□ 0.24
HMGN1-217ENST00000489072 SUMO4Q6EEV6 95 aa16.53■□□□□ 0.24
HMGN1-217ENST00000489072 UBE2WQ96B02 151 aa16.53■□□□□ 0.24
HMGN1-217ENST00000489072 TMEM262E9PQX1 116 aa16.52■□□□□ 0.24
HMGN1-217ENST00000489072 NTF3P20783 257 aa16.52■□□□□ 0.24
HMGN1-217ENST00000489072 RPP21Q9H633 154 aaKnown RBP16.52■□□□□ 0.24
HMGN1-217ENST00000489072 ELOBQ15370 118 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 MPV17L2Q567V2 206 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 KCNIP4Q6PIL6 250 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-217ENST00000489072 BAALCQ8WXS3 180 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 RMI2Q96E14 147 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 COX11Q9Y6N1 276 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 FAT1Q14517 4588 aa16.51■□□□□ 0.23
HMGN1-217ENST00000489072 IGKV2D-24A0A075B6R9 120 aa16.5■□□□□ 0.23
HMGN1-217ENST00000489072 TRGC1P0CF51 173 aa16.5■□□□□ 0.23
HMGN1-217ENST00000489072 WDR73Q6P4I2 378 aa16.5■□□□□ 0.23
HMGN1-217ENST00000489072 CHCHD5Q9BSY4 110 aa16.5■□□□□ 0.23
HMGN1-217ENST00000489072 DNAH8Q96JB1 4490 aa16.5■□□□□ 0.23
HMGN1-217ENST00000489072 ATRAIDQ6UW56 229 aa16.49■□□□□ 0.23
HMGN1-217ENST00000489072 CNFNQ9BYD5 112 aa16.49■□□□□ 0.23
HMGN1-217ENST00000489072 H7C1H1 209 aa16.48■□□□□ 0.23
HMGN1-217ENST00000489072 TMEM97Q5BJF2 176 aa16.48■□□□□ 0.23
HMGN1-217ENST00000489072 ENHOQ6UWT2 76 aa16.48■□□□□ 0.23
HMGN1-217ENST00000489072 C15orf54Q8N8G6 183 aa16.48■□□□□ 0.23
HMGN1-217ENST00000489072 DPH3P1Q9H4G8 78 aa16.48■□□□□ 0.23
HMGN1-217ENST00000489072 CEBPGP53567 150 aa16.47■□□□□ 0.23
HMGN1-217ENST00000489072 Q8N976 141 aa16.47■□□□□ 0.23
HMGN1-217ENST00000489072 GTSF1Q8WW33 167 aa16.47■□□□□ 0.23
HMGN1-217ENST00000489072 HAMPP81172 84 aa16.46■□□□□ 0.23
HMGN1-217ENST00000489072 RASL11AQ6T310 242 aa16.46■□□□□ 0.23
HMGN1-217ENST00000489072 Q0VG73 95 aa16.45■□□□□ 0.22
HMGN1-217ENST00000489072 TWIST1Q15672 202 aa16.45■□□□□ 0.22
HMGN1-217ENST00000489072 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-217ENST00000489072 ANGP03950 147 aaKnown RBP16.44■□□□□ 0.22
HMGN1-217ENST00000489072 PKIAP61925 76 aa16.44■□□□□ 0.22
HMGN1-217ENST00000489072 GAGE6Q13070 117 aa16.44■□□□□ 0.22
HMGN1-217ENST00000489072 IQCJQ1A5X6 159 aa16.44■□□□□ 0.22
HMGN1-217ENST00000489072 FAM231DQ6ZW35 169 aa16.44■□□□□ 0.22
HMGN1-217ENST00000489072 TMEM70Q9BUB7 260 aa16.44■□□□□ 0.22
HMGN1-217ENST00000489072 EIF5A2Q9GZV4 153 aaKnown RBP16.44■□□□□ 0.22
HMGN1-217ENST00000489072 VPS13BQ7Z7G8 4022 aa16.43■□□□□ 0.22
HMGN1-217ENST00000489072 TRBV25-1A0A075B6N4 114 aa16.43■□□□□ 0.22
HMGN1-217ENST00000489072 GATCO43716 136 aaKnown RBP16.43■□□□□ 0.22
HMGN1-217ENST00000489072 FAM210AQ96ND0 272 aa16.43■□□□□ 0.22
HMGN1-217ENST00000489072 NIT2Q9NQR4 276 aa16.43■□□□□ 0.22
HMGN1-217ENST00000489072 FAM30AQ9NZY2 134 aa16.43■□□□□ 0.22
HMGN1-217ENST00000489072 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
HMGN1-217ENST00000489072 EPM2AB3EWF7 344 aa16.42■□□□□ 0.22
HMGN1-217ENST00000489072 RBX1P62877 108 aa16.42■□□□□ 0.22
HMGN1-217ENST00000489072 CRPP02741 224 aa16.41■□□□□ 0.22
HMGN1-217ENST00000489072 SMIM7Q9BQ49 75 aa16.41■□□□□ 0.22
HMGN1-217ENST00000489072 C1orf43Q9BWL3 253 aa16.41■□□□□ 0.22
HMGN1-217ENST00000489072 NDUFS6O75380 124 aaKnown RBP16.4■□□□□ 0.22
HMGN1-217ENST00000489072 SRP19P09132 144 aaKnown RBP16.4■□□□□ 0.22
HMGN1-217ENST00000489072 TRAV26-2A0A0B4J265 109 aa16.39■□□□□ 0.21
HMGN1-217ENST00000489072 SMR3BP02814 79 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-217ENST00000489072 FOXA3P55318 350 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-217ENST00000489072 GATD1Q8NB37 220 aa16.39■□□□□ 0.21
HMGN1-217ENST00000489072 DEFB104AQ8WTQ1 72 aa16.39■□□□□ 0.21
HMGN1-217ENST00000489072 PRR34Q9NV39 138 aa16.39■□□□□ 0.21
HMGN1-217ENST00000489072 A8MWL6 223 aa16.38■□□□□ 0.21
HMGN1-217ENST00000489072 CLPSL2Q6UWE3 100 aa16.38■□□□□ 0.21
HMGN1-217ENST00000489072 LINC01551Q86U37 167 aa16.38■□□□□ 0.21
HMGN1-217ENST00000489072 PGLYRP4Q96LB8 373 aa16.38■□□□□ 0.21
HMGN1-217ENST00000489072 LINC01620Q4KN68 170 aa16.37■□□□□ 0.21
HMGN1-217ENST00000489072 CT83Q5H943 113 aa16.37■□□□□ 0.21
HMGN1-217ENST00000489072 Q5VSD8 79 aa16.37■□□□□ 0.21
HMGN1-217ENST00000489072 LINC00269Q8N2A0 174 aa16.37■□□□□ 0.21
HMGN1-217ENST00000489072 SRRM2Q9UQ35 2752 aaKnown RBP16.37■□□□□ 0.21
HMGN1-217ENST00000489072 MIAQ16674 131 aa16.36■□□□□ 0.21
HMGN1-217ENST00000489072 TMEM243Q9BU79 118 aa16.36■□□□□ 0.21
HMGN1-217ENST00000489072 ZNF727A8MUV8 499 aa16.35■□□□□ 0.21
HMGN1-217ENST00000489072 Q6ZSA8 131 aa16.35■□□□□ 0.21
HMGN1-217ENST00000489072 KRTAP26-1Q6PEX3 210 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms